Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Corneal dystrophy Posterior polymorphous corneal dystrophy
5 genes
Show details
5 of 5 corroborated by 2+ sources
COL8A2(6), OVOL2(6), VSX1(5), GRHL2(5), ZEB1(6)
0.152 1.000 2.79e-14 3.78e-13 ✓ sig. Cluster 75 →
Retinal detachment Retinopathy
9 genes
Show details
3 of 9 corroborated by 2+ sources
WWOX(1), ABCA4(2), ANKRD7(1), COL22A1(1), CFH(2), CLSTN2(1), EYS(3), FAT3(1), RDH5(1)
0.100 0.196 2.76e-14 3.74e-13 ✓ sig. Cluster 187 →
Combined pituitary hormone deficiency Panhypopituitarism
6 genes
Show details
5 of 6 corroborated by 2+ sources
HESX1(3), OTX2(3), LHX3(1), LHX4(3), POU1F1(3), PROP1(4)
0.128 0.667 2.75e-14 3.73e-13 ✓ sig. —
Thrombophilia Thrombosis
8 genes
Show details
8 of 8 corroborated by 2+ sources
FGA(3), F2(6), PLAT(4), F5(6), PROC(5), PROS1(5), THBD(3), F9(6)
0.114 0.250 2.75e-14 3.73e-13 ✓ sig. Cluster 55 →
Hypoglycemia Maturity-onset diabetes of the young
6 genes
Show details
6 of 6 corroborated by 2+ sources
INS(3), ABCC8(5), HNF4A(2), KCNJ11(2), GCK(2), HNF1A(3)
0.171 0.462 2.72e-14 3.70e-13 ✓ sig. Cluster 36 →
Chronic obstructive pulmonary disease Sepsis
8 genes
Show details
8 of 8 corroborated by 2+ sources
NOS3(2), TLR4(2), TNF(2), IL6(2), TGFB1(2), MMP9(2), NOS2(2), MIF(2)
0.116 0.235 2.60e-14 3.53e-13 ✓ sig. —
Memory disorders Seizures
12 genes
Show details
11 of 12 corroborated by 2+ sources
CHRNA7(2), INS(2), HTR1A(2), ACHE(2), IL1B(2), NPY(2), SIGMAR1(1), DRD2(2), SLC17A7(2), CNR1(2), CHRM1(2), GABRA5(2)
0.066 0.235 2.53e-14 3.44e-13 ✓ sig. —
Henoch schoenlein purpura Pemphigus vulgaris
5 genes
Show details
2 of 5 corroborated by 2+ sources
0.238 0.714 2.49e-14 3.39e-13 ✓ sig. Cluster 1 →
Congenital contractural arachnodactyly familial thoracic aortic aneurysm and aortic dissection
6 genes
Show details
6 of 6 corroborated by 2+ sources
FBN1(3), TGFB2(2), BGN(2), LOX(2), MFAP5(2), TGFB3(2)
0.167 0.500 2.36e-14 3.20e-13 ✓ sig. Cluster 12 →
Astrocytoma Attention deficit hyperactivity disorder
62 genes
Show details
8 of 62 corroborated by 2+ sources
ZFPM2(1), TEAD1(1), ANO3(1), BRAF(2), C6orf118(1), CADM2(1), CTNNA2(1), CTNNA3(1), DAB1(1), EFL1(1), ESR2(2), ESRRB(1) +50 more
0.046 0.206 2.35e-14 3.20e-13 ✓ sig. —
Anemia Hematologic disease
8 genes
Show details
3 of 8 corroborated by 2+ sources
H2BC4(1), HFE(1), MTHFR(2), HBS1L(1), H1-2(1), HOXD13(2), JAK2(1), NUP98(2)
0.084 0.444 2.33e-14 3.18e-13 ✓ sig. —
46,xy gonadal dysgenesis 46,xy partial gonadal dysgenesis
5 genes
Show details
3 of 5 corroborated by 2+ sources
NR5A1(2), SOX9(1), SRY(1), DHX37(2), MAP3K1(2)
0.263 0.625 2.33e-14 3.17e-13 ✓ sig. Cluster 38 →
Anemia Thrombocytopenia
14 genes
Show details
10 of 14 corroborated by 2+ sources
EPO(3), MTHFR(2), TNF(2), CSF2(2), ASPG(2), HBS1L(1), CSF3(2), GATA1(3), IFNA2(1), IL3(2), ITPA(2), JAK2(1) +2 more
0.067 0.167 2.27e-14 3.10e-13 ✓ sig. —
nonsyndromic genetic hearing loss Usher syndrome
10 genes
Show details
10 of 10 corroborated by 2+ sources
PCDH15(7), CDH23(8), MYO7A(7), COCH(2), CIB2(5), ESPN(6), OTOA(2), SERPINB6(2), USH1C(7), WHRN(6)
0.085 0.227 2.23e-14 3.04e-13 ✓ sig. Cluster 26 →
Carotid artery disease Ischemic heart disease
13 genes
Show details
5 of 13 corroborated by 2+ sources
TP53(2), APOE(2), AGTR1(1), HMOX1(2), TLR4(1), MMP1(1), MMP9(1), CCL2(2), LTA(1), MRAS(2), GNB3(1), FGB(1) +1 more
0.061 0.236 2.21e-14 3.02e-13 ✓ sig. —
Fatty liver, alcoholic Hyperinsulinism
10 genes
Show details
9 of 10 corroborated by 2+ sources
INS(2), MTTP(1), LEP(2), TNF(2), GPX1(2), CCL2(2), COL3A1(2), UCP2(2), LEPR(2), NEIL1(2)
0.084 0.238 2.19e-14 2.99e-13 ✓ sig. —
Congenital heart septal defect Ventricular septal defect
7 genes
Show details
7 of 7 corroborated by 2+ sources
GATA4(4), PCSK5(2), EPO(2), NKX2-5(4), CITED2(5), YES1(2), SALL4(2)
0.130 0.389 2.07e-14 2.82e-13 ✓ sig. Cluster 364 →
Male infertility Testicular azoospermia
10 genes
Show details
3 of 10 corroborated by 2+ sources
NR5A1(2), DMRT1(2), MCM9(2), MOV10L1(1), AXDND1(1), PNLDC1(1), SHOC1(1), M1AP(1), TEX11(1), ZMYND15(1)
0.074 0.303 2.02e-14 2.76e-13 ✓ sig. Cluster 31 →
Corneal dystrophy Fuchs endothelial dystrophy
7 genes
Show details
5 of 7 corroborated by 2+ sources
AGBL1(6), COL8A2(6), TCF4(7), LAMB1(1), ZEB1(7), SLC4A11(6), KANK4(1)
0.143 0.304 1.98e-14 2.72e-13 ✓ sig. Cluster 75 →
Azoospermia Premature ovarian failure
10 genes
Show details
7 of 10 corroborated by 2+ sources
REC8(1), C14orf39(4), MSH5(5), FANCM(3), BRDT(1), FAHD1(1), HFM1(4), KASH5(3), MCM8(5), MEIOB(3)
0.073 0.313 1.86e-14 2.55e-13 ✓ sig. Cluster 31 →
Congenital myopathy Muscular dystrophy
9 genes
Show details
4 of 9 corroborated by 2+ sources
GMPPB(1), LARGE1(1), LMNA(1), TTN(3), DYSF(3), FKRP(1), MYH2(2), SELENON(4), CHKB(1)
0.102 0.200 1.84e-14 2.53e-13 ✓ sig. —
Generalized epilepsy with febrile seizures plus Rolandic epilepsy
7 genes
Show details
6 of 7 corroborated by 2+ sources
CPA6(2), RELN(1), GABRG2(3), SCN1A(8), SCN1B(7), SCN2A(2), SCN9A(2)
0.123 0.438 1.73e-14 2.38e-13 ✓ sig. Cluster 47 →
Atrial flutter Sick sinus syndrome
8 genes
Show details
4 of 8 corroborated by 2+ sources
KCNJ5(3), PITX2(1), MYH6(4), ZFHX3(1), SCN5A(6), TTN(1), HCN4(7), SCN10A(1)
0.087 0.444 1.72e-14 2.37e-13 ✓ sig. Cluster 4 →
Brain ischemia Colitis
9 genes
Show details
9 of 9 corroborated by 2+ sources
MPO(2), IGF1(2), IL1B(2), TNF(2), IL6(2), RELA(2), PTGS2(2), IL17A(2), NOS2(2)
0.095 0.273 1.72e-14 2.36e-13 ✓ sig. Cluster 114 →
Focal segmental glomerulosclerosis Nephrotic syndrome, focal segmental type
5 genes
Show details
5 of 5 corroborated by 2+ sources
ACTN4(3), MYO1E(4), PAX2(4), ANLN(4), CRB2(5)
0.167 1.000 1.65e-14 2.26e-13 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.