Gene Gene information from NCBI Gene database.
Entrez ID 7042
Gene name Transforming growth factor beta 2
Gene symbol TGFB2
Synonyms (NCBI Gene)
G-TSFLDS4TGF-beta2
Chromosome 1
Chromosome location 1q41
Summary This gene encodes a secreted ligand of the TGF-beta (transforming growth factor-beta) superfamily of proteins. Ligands of this family bind various TGF-beta receptors leading to recruitment and activation of SMAD family transcription factors that regulate
SNPs SNP information provided by dbSNP.
31
SNP ID Visualize variation Clinical significance Consequence
rs10482810 G>C Conflicting-interpretations-of-pathogenicity, benign-likely-benign, likely-benign Non coding transcript variant, missense variant, coding sequence variant
rs11466408 C>T Conflicting-interpretations-of-pathogenicity, likely-benign Intron variant
rs387907278 C>A Pathogenic Coding sequence variant, missense variant, non coding transcript variant
rs398122884 ACAAT>- Pathogenic Coding sequence variant, frameshift variant, non coding transcript variant
rs398122885 C>A,T Pathogenic Synonymous variant, coding sequence variant, stop gained, non coding transcript variant
miRNA miRNA information provided by mirtarbase database.
169
miRTarBase ID miRNA Experiments Reference
MIRT002285 hsa-miR-141-3p ImmunoblotLuciferase reporter assayqRT-PCR 18483486
MIRT006058 hsa-miR-29b-3p ELISAGFP reporter assayqRT-PCR 21273536
MIRT006058 hsa-miR-29b-3p ELISAGFP reporter assayqRT-PCR 21273536
MIRT006058 hsa-miR-29b-3p ELISAGFP reporter assayqRT-PCR 21273536
MIRT017363 hsa-miR-335-5p Microarray 18185580
Transcription factors Transcription factors information provided by TRRUST V2 database.
5
Transcription factor Regulation Reference
ATF1 Activation 11776974
ATF2 Repression 1400310
USF1 Activation 11776974
USF2 Activation 11776974
USF2 Unknown 8943301
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
204
GO ID Ontology Definition Evidence Reference
GO:0000902 Process Cell morphogenesis IDA 15896309
GO:0001501 Process Skeletal system development IEA
GO:0001501 Process Skeletal system development ISS
GO:0001502 Process Cartilage condensation IEA
GO:0001540 Function Amyloid-beta binding IDA 16227582
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
190220 11768 ENSG00000092969
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P61812
Protein name Transforming growth factor beta-2 proprotein (Cetermin) (Glioblastoma-derived T-cell suppressor factor) (G-TSF) [Cleaved into: Latency-associated peptide (LAP); Transforming growth factor beta-2 (TGF-beta-2)]
Protein function [Transforming growth factor beta-2 proprotein]: Precursor of the Latency-associated peptide (LAP) and Transforming growth factor beta-2 (TGF-beta-2) chains, which constitute the regulatory and active subunit of TGF-beta-2, respectively. {ECO:000
PDB 1TFG , 2TGI , 4KXZ , 5TX4 , 5TY4 , 6I9J , 6XM2 , 7RCO , 8DC0 , 8FXS , 8FXV
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00688 TGFb_propeptide 20 284 TGF-beta propeptide Family
PF00019 TGF_beta 316 413 Transforming growth factor beta like domain Domain
Sequence
Sequence length 414
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
52
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Aortic aneurysm, familial thoracic, TGFB2 related Likely pathogenic; Pathogenic rs869312903 RCV001824688
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Atrial septal defect 1 Pathogenic rs2102630084 RCV001731121
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Ehlers-Danlos syndrome Pathogenic rs2102630133 RCV002278074
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Familial aortopathy Likely pathogenic; Pathogenic rs863223792, rs1660010402 RCV001174570
RCV001174870
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ALZHEIMER DISEASE GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ANKYLOSING SPONDYLITIS AND OTHER INFLAMMATORY SPONDYLOPATHIES Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Aortic aneurysm Conflicting classifications of pathogenicity ClinVar
Disgenet, GWAS catalog
Disgenet, GWAS catalog
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
AORTIC ANEURYSM, THORACIC CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acute Erythroblastic Leukemia Erythroblastic Leukemia BEFREE 2590216
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Adenocarcinoma BEFREE 10836999, 15099960, 8253361
★☆☆☆☆
Found in Text Mining only
Adrenal Hyperplasia Congenital Congenital adrenal hyperplasia Pubtator 24380766 Stimulate
★☆☆☆☆
Found in Text Mining only
Adult Medulloblastoma Medulloblastoma BEFREE 22582395
★☆☆☆☆
Found in Text Mining only
Age related macular degeneration Age-related macular degeneration BEFREE 25875044
★☆☆☆☆
Found in Text Mining only
Alopecia Alopecia BEFREE 29949176
★☆☆☆☆
Found in Text Mining only
Alzheimer`s Disease Alzheimer disease GWASCAT_DG 26830138
★☆☆☆☆
Found in Text Mining only
Ameloblastoma Ameloblastoma BEFREE 8450031
★☆☆☆☆
Found in Text Mining only
Amyotrophic Lateral Sclerosis Amyotrophic Lateral Sclerosis BEFREE 15837588
★☆☆☆☆
Found in Text Mining only
Anaplasia Anaplasia BEFREE 29891662
★☆☆☆☆
Found in Text Mining only