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Gene Gene information from NCBI Gene database.
Entrez ID 673
Gene name B-Raf proto-oncogene, serine/threonine kinase
Gene symbol BRAF
Synonyms (NCBI Gene)
B-RAF1B-rafBRAF-1BRAF1NS7RAFB1
Chromosome 7
Chromosome location 7q34
Summary This gene encodes a protein belonging to the RAF family of serine/threonine protein kinases. This protein plays a role in regulating the MAP kinase/ERK signaling pathway, which affects cell division, differentiation, and secretion. Mutations in this gene,
SNPs SNP information provided by dbSNP.
107 Show/Hide all (107)
SNP ID Visualize variation Clinical significance Consequence
rs113488022 A>C,G,T Pathogenic, likely-pathogenic, uncertain-significance, other, drug-response Non coding transcript variant, intron variant, coding sequence variant, missense variant
rs121913225 A>G Likely-pathogenic Non coding transcript variant, intron variant, coding sequence variant, missense variant
rs121913226 TTT>- Likely-pathogenic Non coding transcript variant, inframe deletion, intron variant, coding sequence variant
rs121913227 AC>CT,TT Drug-response, pathogenic Non coding transcript variant, intron variant, coding sequence variant, missense variant
rs121913335 T>G Likely-pathogenic Non coding transcript variant, intron variant, coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
15 Show/Hide all (15)
miRTarBase ID miRNA Experiments Reference
MIRT045803 hsa-miR-191-5p CLASH 23622248
MIRT043975 hsa-miR-378a-5p CLASH 23622248
MIRT037574 hsa-miR-744-5p CLASH 23622248
MIRT053218 hsa-miR-143-3p Luciferase reporter assayqRT-PCRWestern blot 23128394
MIRT053219 hsa-miR-145-5p Luciferase reporter assayqRT-PCRWestern blot 23128394
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
90 Show/Hide all (90)
GO ID Ontology Definition Evidence Reference
GO:0000165 Process MAPK cascade IDA 18567582, 29433126
GO:0000166 Function Nucleotide binding IEA
GO:0002318 Process Myeloid progenitor cell differentiation IEA
GO:0003824 Function Catalytic activity IEA
GO:0004672 Function Protein kinase activity IDA 17563371
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
164757 1097 ENSG00000157764
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P15056
Protein name Serine/threonine-protein kinase B-raf (EC 2.7.11.1) (Proto-oncogene B-Raf) (p94) (v-Raf murine sarcoma viral oncogene homolog B1)
Protein function Protein kinase involved in the transduction of mitogenic signals from the cell membrane to the nucleus (Probable). Phosphorylates MAP2K1, and thereby activates the MAP kinase signal transduction pathway (PubMed:21441910, PubMed:29433126). Phosph
PDB 1UWH , 1UWJ , 2FB8 , 2L05 , 3C4C , 3D4Q , 3IDP , 3II5 , 3NY5 , 3OG7 , 3PPJ , 3PPK , 3PRF , 3PRI , 3PSB , 3PSD , 3Q4C , 3Q96 , 3SKC , 3TV4 , 3TV6 , 4CQE , 4DBN , 4E26 , 4E4X , 4EHE , 4EHG , 4FC0 , 4FK3 , 4G9C , 4G9R , 4H58 , 4JVG , 4KSP , 4KSQ , 4MBJ , 4MNE , 4MNF , 4PP7 , 4R5Y , 4RZV , 4RZW , 4WO5 , 4XV1 , 4XV2 , 4XV3 , 4XV9 , 4YHT , 5C9C , 5CSW , 5CSX
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00130 C1_1 235 → 282 Phorbol esters/diacylglycerol binding domain (C1 domain) Domain
PF02196 RBD 156 → 225 Raf-like Ras-binding domain Domain
PF07714 PK_Tyr_Ser-Thr 457 → 714 Protein tyrosine and serine/threonine kinase Domain
Tissue specificity TISSUE SPECIFICITY: Brain and testis.
Sequence
MAALSGGGGGGAEPGQALFNGDMEPEAGAGAGAAASSAADPAIPEEVWNIKQMIKLTQEH
IEALLDKFGGEHNPPSIYLEAYEEYTSKLDALQQREQQLLESLGNGTDFSVSSSASMDTV
TSSSSSSLSVLPSSLSVFQNPTDVARSNPKSPQKPIVRVFLPNKQRTVVPARCGVTVRDS
LKKALMMRGLIPECCAVYRIQDGEKKPIGWDTDISWLTGEELHVE
VLENVPLTTHNFVRK
TFFTLAFCDFCRKLLFQGFRCQTCGYKFHQRCSTEVPLMCVN
YDQLDLLFVSKFFEHHPI
PQEEASLAETALTSGSSPSAPASDSIGPQILTSPSPSKSIPIPQPFRPADEDHRNQFGQR
DRSSSAPNVHINTIEPVNIDDLIRDQGFRGDGGSTTGLSATPPASLPGSLTNVKALQKSP
GPQRERKSSSSSEDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDV
AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHH
LHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATV
KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN
NRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASI
ELLARS
LPKIHRSASEPSLNRAGFQTEDFSLYACASPKTPIQAGGYGAFPVH
Sequence length 766
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
KEGG Pathway Reactome Pathway
EGFR tyrosine kinase inhibitor resistance Spry regulation of FGF signaling
Endocrine resistance Frs2-mediated activation
MAPK signaling pathway RAF activation
ErbB signaling pathway MAP2K and MAPK activation
Rap1 signaling pathway Negative feedback regulation of MAPK pathway
cAMP signaling pathway Negative regulation of MAPK pathway
Chemokine signaling pathway Signaling by moderate kinase activity BRAF mutants
FoxO signaling pathway Signaling by high-kinase activity BRAF mutants
mTOR signaling pathway Signaling by BRAF and RAF fusions
Vascular smooth muscle contraction Paradoxical activation of RAF signaling by kinase inactive BRAF
Focal adhesion Signaling downstream of RAS mutants
Natural killer cell mediated cytotoxicity  
Long-term potentiation  
Neurotrophin signaling pathway  
Serotonergic synapse  
Long-term depression  
Regulation of actin cytoskeleton  
Insulin signaling pathway  
Progesterone-mediated oocyte maturation  
Parathyroid hormone synthesis, secretion and action  
Cushing syndrome  
Alzheimer disease  
Pathways of neurodegeneration - multiple diseases  
Alcoholism  
Hepatitis C  
Hepatitis B  
Pathways in cancer  
Proteoglycans in cancer  
Chemical carcinogenesis - reactive oxygen species  
Colorectal cancer  
Renal cell carcinoma  
Pancreatic cancer  
Endometrial cancer  
Glioma  
Prostate cancer  
Thyroid cancer  
Melanoma  
Bladder cancer  
Chronic myeloid leukemia  
Acute myeloid leukemia  
Non-small cell lung cancer  
Breast cancer  
Hepatocellular carcinoma  
Gastric cancer  
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
142
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Show/Hide Causal Diseases (50)
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Ataxia-telangiectasia syndrome Pathogenic; Likely pathogenic rs180177036, rs121913376 RCV001849264
RCV002051798
★★★★★
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
BRAF-related disorder Pathogenic; Likely pathogenic rs180177042, rs180177035, rs180177036, rs387906660, rs397507473, rs397507483 RCV005867936
RCV004752707
RCV003415705
RCV003398558
RCV003407389
View all (1 more)
★★★★★
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Carcinoma of colon Pathogenic rs180177032, rs180177033, rs121913348, rs121913364 RCV000014995
RCV000014996
RCV000014997
RCV000014999
★★★★★
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Cardio-facio-cutaneous syndrome Pathogenic; Likely pathogenic rs121913341, rs180177036, rs180177042, rs794729219, rs869025606, rs121913348, rs180177034, rs121913369, rs121913357, rs180177035, rs121913355, rs180177038, rs180177039, rs180177040, rs180177041
View all (27 more)
RCV000154266
RCV000844617
RCV000150199
RCV002222430
RCV000208777
View all (43 more)
★★★★★
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Show/Hide Unknown Diseases (92)
Phenotype Name Clinical Significance Source Reference Evidence Score
Acute myeloid leukemia Conflicting classifications of pathogenicity ClinVar —
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Alveolar rhabdomyosarcoma Conflicting classifications of pathogenicity ClinVar —
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ALZHEIMER DISEASE — GWAS catalog 39998322
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AMELOBLASTOMA — CTD 24859340
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Show/Hide Text Mining Associations (1048)
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Abnormal dermatoglyphic pattern Abnormal dermatoglyphic pattern HPO_DG
★★★★★
★☆☆☆☆
Found in Text Mining only
Absent eyebrow Absent eyebrow CLINVAR_DG
★★★★★
★☆☆☆☆
Found in Text Mining only
Absent eyebrow Absent eyebrow HPO_DG
★★★★★
★☆☆☆☆
Found in Text Mining only
Acoustic Neuroma Acoustic Neuroma BEFREE 23224067
★★★★★
★☆☆☆☆
Found in Text Mining only
Acquired cubitus valgus Cubitus valgus HPO_DG
★★★★★
★☆☆☆☆
Found in Text Mining only
Acquired Kyphoscoliosis Acquired Kyphoscoliosis HPO_DG
★★★★★
★☆☆☆☆
Found in Text Mining only
Acral Lentiginous Malignant Melanoma Acral Lentiginous Malignant Melanoma BEFREE 16899595, 23993026, 25766129, 26138035, 26709572, 29512974, 29951919, 31021835
★★★★★
★☆☆☆☆
Found in Text Mining only
Acromegaly Acromegaly Pubtator 25329702 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Acromegaly Acromegaly BEFREE 25329702, 26575115, 29890543
★★★★★
★☆☆☆☆
Found in Text Mining only
ACTH-Secreting Pituitary Adenoma Pituitary adenoma BEFREE 30093687
★★★★★
★☆☆☆☆
Found in Text Mining only