Disease Clusters?
Groups of diseases that share a large number of curated genes with each other, computed via label propagation over the shared-gene similarity graph. See also Shared-Gene Disease Pairs for pairwise comparisons.
← Back to all clusters
Cluster 13
24
Diseases
520
Unique genes
0.084
Avg. similarity score
Hypotension
Most-connected disease (7 links)
Disease
Searched: seizures, early-onset, with neurodegeneration and brain calcifications
Pinned (dragged)
Node size = connections within this cluster · edge thickness = similarity strength · hover an edge for its details ·
click a node to select it and show its pairs below (double-click or Ctrl/⌘-click opens the disease page) ·
drag a node to pin it in place · scroll/pinch to zoom.
seizures, early-onset, with neurodegeneration and brain calcifications
Hypotension
Bradycardia
Amphetamine or sympathomimetic abuse
Dyskinesia, drug-induced
Hyperkinesia
Movement disorder
Tremor
Catalepsy
Seizures
Amnesia
Substance-induced psychosis
Bradyopsia
Cyp2d6 deficiency
Edema
Essential tremor
Hyperalgesia
Catatonia
Neurogenic bladder
Periodic limb movement disorder
Retrograde amnesia
immunodeficiency 92
neurodevelopmental disorder with cerebellar atrophy and motor dysfunction
neurodevelopmental disorder with language impairment and behavioral abnormalities
Member diseases (most connected first ‐ the cluster's core)
| Disease ⇵ | Connections in cluster ⇵ | Significant partners ⇵ | Curated genes ⇵ |
|---|---|---|---|
| Hypotension | 7 | 7 | 67 |
| Bradycardia | 6 | 6 | 26 |
| Amphetamine or sympathomimetic abuse | 5 | 5 | 77 |
| Dyskinesia, drug-induced | 5 | 5 | 15 |
| Hyperkinesia | 5 | 5 | 33 |
| Movement disorder | 5 | 5 | 57 |
| Tremor | 5 | 5 | 15 |
| Catalepsy | 4 | 4 | 16 |
| Seizures | 4 | 4 | 141 |
| Amnesia | 3 | 3 | 18 |
| Substance-induced psychosis | 3 | 3 | 17 |
| Bradyopsia | 2 | 2 | 2 |
| Cyp2d6 deficiency | 2 | 2 | 1 |
| Edema | 2 | 2 | 49 |
| Essential tremor | 2 | 2 | 97 |
| Hyperalgesia | 2 | 2 | 89 |
| Catatonia | 1 | 1 | 1 |
| Neurogenic bladder | 1 | 1 | 1 |
| Periodic limb movement disorder | 1 | 1 | 11 |
| Retrograde amnesia | 1 | 1 | 1 |
| immunodeficiency 92 | 1 | 1 | 1 |
| neurodevelopmental disorder with cerebellar atrophy and motor dysfunction | 1 | 1 | 1 |
| neurodevelopmental disorder with language impairment and behavioral abnormalities | 1 | 1 | 1 |
| seizures, early-onset, with neurodegeneration and brain calcifications | 1 | 1 | 1 |
Top shared genes (genes linked to 2+ member diseases ‐ top 100 shown, download for all)
| Gene ⇵ | Member diseases ⇵ | Linked diseases |
|---|---|---|
| DRD2 | 8 / 24 | Amphetamine or sympathomimetic abuse, Bradycardia, Catalepsy, Dyskinesia, drug-induced and 4 more |
| DRD3 | 8 / 24 | Amphetamine or sympathomimetic abuse, Dyskinesia, drug-induced, Essential tremor, Hyperalgesia and 4 more |
| PDYN | 8 / 24 | Amnesia, Amphetamine or sympathomimetic abuse, Bradycardia, Dyskinesia, drug-induced and 4 more |
| ADORA2A | 7 / 24 | Amphetamine or sympathomimetic abuse, Hyperkinesia, Hypotension, Movement disorder and 3 more |
| DRD1 | 7 / 24 | Amphetamine or sympathomimetic abuse, Catalepsy, Dyskinesia, drug-induced, Hyperkinesia and 3 more |
| POMC | 6 / 24 | Amnesia, Bradycardia, Catalepsy, Edema and 2 more |
| AGT | 5 / 24 | Bradycardia, Catalepsy, Hyperalgesia, Hypotension and 1 more |
| CNR1 | 5 / 24 | Catalepsy, Hyperalgesia, Hypotension, Movement disorder and 1 more |
| IL6 | 5 / 24 | Amnesia, Edema, Hyperalgesia, Hypotension and 1 more |
| OPRM1 | 5 / 24 | Amphetamine or sympathomimetic abuse, Hyperalgesia, Movement disorder, Seizures and 1 more |
| TAC1 | 5 / 24 | Amnesia, Bradycardia, Edema, Hyperalgesia and 1 more |
| TRH | 5 / 24 | Amnesia, Bradycardia, Catalepsy, Seizures and 1 more |
| ACHE | 4 / 24 | Amphetamine or sympathomimetic abuse, Movement disorder, Seizures, Tremor |
| CALCA | 4 / 24 | Catalepsy, Edema, Hyperalgesia, Hyperkinesia |
| CAT | 4 / 24 | Dyskinesia, drug-induced, Edema, Hypotension, Seizures |
| CCK | 4 / 24 | Catalepsy, Dyskinesia, drug-induced, Hyperkinesia, Seizures |
| CRH | 4 / 24 | Bradycardia, Hypotension, Movement disorder, Seizures |
| CYP2D6 | 4 / 24 | Amphetamine or sympathomimetic abuse, Bradycardia, Cyp2d6 deficiency, Tremor |
| FOS | 4 / 24 | Amphetamine or sympathomimetic abuse, Hyperalgesia, Hyperkinesia, Seizures |
| GCG | 4 / 24 | Bradycardia, Catalepsy, Hyperkinesia, Hypotension |
| GSTP1 | 4 / 24 | Amphetamine or sympathomimetic abuse, Essential tremor, Movement disorder, Substance-induced psychosis |
| HTR1A | 4 / 24 | Bradycardia, Seizures, Substance-induced psychosis, Tremor |
| KNG1 | 4 / 24 | Bradycardia, Edema, Hyperalgesia, Hypotension |
| NGF | 4 / 24 | Amnesia, Hyperalgesia, Hyperkinesia, Seizures |
| OXT | 4 / 24 | Edema, Hyperkinesia, Hypotension, Seizures |
| ADORA1 | 3 / 24 | Bradycardia, Catalepsy, Hypotension |
| AVP | 3 / 24 | Amnesia, Hyperalgesia, Hypotension |
| CNTNAP5 | 3 / 24 | Essential tremor, Movement disorder, Periodic limb movement disorder |
| EDN1 | 3 / 24 | Bradycardia, Hyperalgesia, Hypotension |
| GDNF | 3 / 24 | Amphetamine or sympathomimetic abuse, Dyskinesia, drug-induced, Hyperalgesia |
| HCN1 | 3 / 24 | Movement disorder, Periodic limb movement disorder, Seizures |
| HTR1B | 3 / 24 | Amphetamine or sympathomimetic abuse, Hypotension, Seizures |
| IGF1 | 3 / 24 | Essential tremor, Hyperalgesia, Movement disorder |
| IL1A | 3 / 24 | Amnesia, Hyperalgesia, Hypotension |
| IL1B | 3 / 24 | Hyperalgesia, Hypotension, Seizures |
| IL2 | 3 / 24 | Amnesia, Hyperkinesia, Hypotension |
| INS | 3 / 24 | Edema, Hypotension, Seizures |
| MAP2K5 | 3 / 24 | Amphetamine or sympathomimetic abuse, Movement disorder, Periodic limb movement disorder |
| NOS1 | 3 / 24 | Amphetamine or sympathomimetic abuse, Hyperalgesia, Seizures |
| NTS | 3 / 24 | Bradycardia, Catalepsy, Hyperkinesia |
| PRL | 3 / 24 | Bradycardia, Catalepsy, Hypotension |
| PTGS2 | 3 / 24 | Edema, Hyperalgesia, Seizures |
| RGS9 | 3 / 24 | Bradyopsia, Dyskinesia, drug-induced, Substance-induced psychosis |
| SLC12A5 | 3 / 24 | Hyperalgesia, Movement disorder, Seizures |
| SLC6A3 | 3 / 24 | Amphetamine or sympathomimetic abuse, Hyperkinesia, Substance-induced psychosis |
| TH | 3 / 24 | Catalepsy, Dyskinesia, drug-induced, Hyperkinesia |
| TNF | 3 / 24 | Edema, Hyperalgesia, Hypotension |
| VIP | 3 / 24 | Edema, Hyperalgesia, Hypotension |
| ACE | 2 / 24 | Hypotension, Substance-induced psychosis |
| ADRA1B | 2 / 24 | Hypotension, Seizures |
| AKT1 | 2 / 24 | Amphetamine or sympathomimetic abuse, Substance-induced psychosis |
| APOE | 2 / 24 | Amnesia, Seizures |
| ATP7A | 2 / 24 | Seizures, Tremor |
| BCHE | 2 / 24 | Hyperkinesia, Seizures |
| BDKRB2 | 2 / 24 | Hyperalgesia, Hypotension |
| BDNF | 2 / 24 | Amphetamine or sympathomimetic abuse, Seizures |
| BTBD9 | 2 / 24 | Movement disorder, Periodic limb movement disorder |
| CACNA1D | 2 / 24 | Bradycardia, Edema |
| CCDC148 | 2 / 24 | Movement disorder, Periodic limb movement disorder |
| CHRM2 | 2 / 24 | Bradycardia, Neurogenic bladder |
| CHRM4 | 2 / 24 | Catatonia, Tremor |
| CNR2 | 2 / 24 | Catalepsy, Hyperalgesia |
| COMT | 2 / 24 | Amphetamine or sympathomimetic abuse, Hyperalgesia |
| CRHR1 | 2 / 24 | Hyperalgesia, Hyperkinesia |
| CTNNA3 | 2 / 24 | Edema, Essential tremor |
| CXCL8 | 2 / 24 | Edema, Hyperalgesia |
| DPP6 | 2 / 24 | Essential tremor, Movement disorder |
| EDN2 | 2 / 24 | Bradycardia, Hypotension |
| EDN3 | 2 / 24 | Bradycardia, Hypotension |
| EMB | 2 / 24 | Movement disorder, Periodic limb movement disorder |
| FOSB | 2 / 24 | Dyskinesia, drug-induced, Movement disorder |
| GABBR1 | 2 / 24 | Amphetamine or sympathomimetic abuse, Hyperkinesia |
| GABRA1 | 2 / 24 | Essential tremor, Seizures |
| GABRG2 | 2 / 24 | Amphetamine or sympathomimetic abuse, Seizures |
| GAD1 | 2 / 24 | Amphetamine or sympathomimetic abuse, Dyskinesia, drug-induced |
| GAD2 | 2 / 24 | Amphetamine or sympathomimetic abuse, Seizures |
| GEMIN5 | 2 / 24 | Essential tremor, neurodevelopmental disorder with cerebellar atrophy and motor dysfunction |
| GNAI1 | 2 / 24 | Amnesia, Essential tremor |
| GNAO1 | 2 / 24 | Essential tremor, Movement disorder |
| GRIA1 | 2 / 24 | Hyperkinesia, Hypotension |
| GRIA2 | 2 / 24 | Hyperkinesia, neurodevelopmental disorder with language impairment and behavioral abnormalities |
| GRIN2B | 2 / 24 | Hyperalgesia, Hypotension |
| GRM2 | 2 / 24 | Amphetamine or sympathomimetic abuse, Substance-induced psychosis |
| GSTM1 | 2 / 24 | Amphetamine or sympathomimetic abuse, Movement disorder |
| HTR2A | 2 / 24 | Hyperalgesia, Hyperkinesia |
| HTR6 | 2 / 24 | Amphetamine or sympathomimetic abuse, Substance-induced psychosis |
| LMO1 | 2 / 24 | Movement disorder, Periodic limb movement disorder |
| MECP2 | 2 / 24 | Hyperalgesia, Seizures |
| MEIS1 | 2 / 24 | Movement disorder, Periodic limb movement disorder |
| MYT1 | 2 / 24 | Movement disorder, Periodic limb movement disorder |
| NISCH | 2 / 24 | Bradycardia, Hypotension |
| NKAIN2 | 2 / 24 | Essential tremor, Hypotension |
| NLRP1 | 2 / 24 | Essential tremor, Hypotension |
| NOS2 | 2 / 24 | Hyperalgesia, Seizures |
| NPY | 2 / 24 | Hyperkinesia, Seizures |
| NPY1R | 2 / 24 | Amphetamine or sympathomimetic abuse, Substance-induced psychosis |
| NRG1 | 2 / 24 | Amphetamine or sympathomimetic abuse, Movement disorder |
| NRROS | 2 / 24 | Seizures, seizures, early-onset, with neurodegeneration and brain calcifications |
| PICK1 | 2 / 24 | Amphetamine or sympathomimetic abuse, Substance-induced psychosis |
| PLAT | 2 / 24 | Amphetamine or sympathomimetic abuse, Hypotension |
What do these columns mean?
- Connections in cluster
- How many other members this disease has a shared-gene link to (the node size in the network above). The most-connected diseases are the cluster's core.
- Significant partners
- How many of those links are statistically significant (FDR q < 0.05).
- Curated genes
- Distinct curated genes linked to that disease in GeDiPNet.
- Member diseases (Top shared genes)
- How many of this cluster's diseases are linked to the gene, out of the cluster's total. Genes shared by many members are the most direct explanation of why they group together.
- Overlap genes (x / y)
- x = genes shared between this cluster and the pathway/GO term; y = that pathway/GO term's total gene count. A higher x relative to y (and to the cluster's own size) means a tighter biological match.
- Cluster gene count
- Total distinct genes across every disease in this cluster -- the "n" used in the significance test below.
- Fold enrichment
- Observed overlap divided by the overlap expected by chance, given the cluster's gene count, the pathway/term's size and the gene universe tested. 5× means five times more shared genes than random. Tells strong hits apart when q-values are all vanishingly small.
- P-value / FDR q-value
- Is this pathway/GO term's overlap with the cluster more than chance? Upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pathway/term (prefer the q-value -- it accounts for testing many at once).
- Shared genes (Pairs within this cluster)
- Number of curated genes the two diseases in that row have in common.
- Similarity score (Pairs within this cluster)
- Jaccard-based gene overlap between the two specific diseases in that row -- same metric as the main Shared-Gene Disease Pairs page.
Enriched Pathways (why this cluster is grouped, biologically)
| Pathway ⇵ | Source ⇵ | Overlap genes ⇵ | Fold enrichment ⇵ | P-value ⇵ | FDR q-value ⇵ |
|---|---|---|---|---|---|
| Neuroactive ligand-receptor interaction | KEGG | 90 / 370 | 5.6× | 1.72e-43 | 1.60e-39 ✓ sig. |
| cAMP signaling pathway | KEGG | 59 / 226 | 6.0× | 2.76e-30 | 7.49e-27 ✓ sig. |
| Hormone signaling | KEGG | 55 / 219 | 5.8× | 2.39e-27 | 4.92e-24 ✓ sig. |
| Peptide ligand-binding receptors | Reactome | 36 / 106 | 7.8× | 3.85e-23 | 4.92e-20 ✓ sig. |
| Cholinergic synapse | KEGG | 32 / 115 | 6.4× | 9.04e-18 | 4.76e-15 ✓ sig. |
| G alpha (q) signalling events | Reactome | 37 / 172 | 5.0× | 2.55e-16 | 1.04e-13 ✓ sig. |
| Serotonergic synapse | KEGG | 30 / 115 | 6.0× | 6.90e-16 | 2.63e-13 ✓ sig. |
| Chagas disease | KEGG | 28 / 103 | 6.3× | 2.05e-15 | 7.16e-13 ✓ sig. |
| Circadian entrainment | KEGG | 26 / 97 | 6.2× | 3.03e-14 | 8.56e-12 ✓ sig. |
| Dopaminergic synapse | KEGG | 30 / 132 | 5.2× | 3.88e-14 | 1.07e-11 ✓ sig. |
| Cocaine addiction | KEGG | 19 / 49 | 9.0× | 5.04e-14 | 1.34e-11 ✓ sig. |
| Inflammatory mediator regulation of TRP channels | KEGG | 26 / 99 | 6.1× | 5.16e-14 | 1.37e-11 ✓ sig. |
| G alpha (i) signalling events | Reactome | 40 / 249 | 3.7× | 4.71e-13 | 1.07e-10 ✓ sig. |
| AGE-RAGE signaling pathway in diabetic complications | KEGG | 25 / 101 | 5.7× | 6.88e-13 | 1.52e-10 ✓ sig. |
| Calcium signaling pathway | KEGG | 39 / 254 | 3.5× | 4.02e-12 | 7.78e-10 ✓ sig. |
Enriched GO Terms (Biological Process, a second line of biological evidence)
| GO term ⇵ | GO ID ⇵ | Overlap genes ⇵ | Fold enrichment ⇵ | P-value ⇵ | FDR q-value ⇵ |
|---|---|---|---|---|---|
| chemical synaptic transmission | GO:0007268 | 57 / 236 | 8.7× | 3.17e-37 | 2.74e-33 ✓ sig. |
| response to hypoxia | GO:0001666 | 38 / 176 | 7.8× | 3.24e-23 | 8.23e-20 ✓ sig. |
| response to ethanol | GO:0045471 | 30 / 110 | 9.8× | 1.00e-21 | 2.04e-18 ✓ sig. |
| sensory perception of pain | GO:0019233 | 21 / 44 | 17.2× | 1.61e-21 | 3.16e-18 ✓ sig. |
| response to xenobiotic stimulus | GO:0009410 | 42 / 248 | 6.1× | 3.09e-21 | 5.85e-18 ✓ sig. |
| signal transduction | GO:0007165 | 135 / 2,125 | 2.3× | 6.08e-21 | 1.10e-17 ✓ sig. |
| response to nicotine | GO:0035094 | 19 / 40 | 17.1× | 1.54e-19 | 2.23e-16 ✓ sig. |
| monoatomic ion transport | GO:0006811 | 66 / 667 | 3.6× | 1.94e-19 | 2.78e-16 ✓ sig. |
| G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger | GO:0007187 | 21 / 54 | 14.0× | 3.21e-19 | 4.36e-16 ✓ sig. |
| excitatory postsynaptic potential | GO:0060079 | 23 / 69 | 12.0× | 3.78e-19 | 5.03e-16 ✓ sig. |
| locomotory behavior | GO:0007626 | 26 / 99 | 9.4× | 1.52e-18 | 1.89e-15 ✓ sig. |
| monoatomic ion transmembrane transport | GO:0034220 | 49 / 404 | 4.4× | 3.22e-18 | 3.88e-15 ✓ sig. |
| neuropeptide signaling pathway | GO:0007218 | 25 / 111 | 8.1× | 3.71e-16 | 3.23e-13 ✓ sig. |
| regulation of blood pressure | GO:0008217 | 22 / 83 | 9.5× | 5.53e-16 | 4.66e-13 ✓ sig. |
| vasodilation | GO:0042311 | 18 / 50 | 12.9× | 5.93e-16 | 4.93e-13 ✓ sig. |
Pairs within this cluster, by significance
| Disease A ⇵ | Disease B ⇵ | Similarity score ⇵ | Shared genes ⇵ | P-value ⇵ | FDR q-value ⇵ |
|---|---|---|---|---|---|
| Movement disorder | Periodic limb movement disorder | 0.190 | 11 | 6.41e-28 | 1.81e-26 ✓ sig. |
| Bradycardia | Hypotension | 0.175 | 14 | 1.89e-27 | 5.23e-26 ✓ sig. |
| Hyperalgesia | Hypotension | 0.106 | 15 | 2.12e-20 | 4.10e-19 ✓ sig. |
| Amphetamine or sympathomimetic abuse | Substance-induced psychosis | 0.118 | 10 | 1.01e-19 | 1.90e-18 ✓ sig. |
| Bradycardia | Catalepsy | 0.229 | 8 | 2.55e-19 | 4.67e-18 ✓ sig. |
| Hypotension | Seizures | 0.077 | 15 | 2.88e-17 | 4.76e-16 ✓ sig. |
| Catalepsy | Hypotension | 0.105 | 8 | 1.04e-15 | 1.56e-14 ✓ sig. |
| Catalepsy | Hyperkinesia | 0.163 | 7 | 1.19e-15 | 1.77e-14 ✓ sig. |
| Movement disorder | Seizures | 0.070 | 13 | 3.15e-15 | 4.54e-14 ✓ sig. |
| Amphetamine or sympathomimetic abuse | Movement disorder | 0.089 | 11 | 3.57e-15 | 5.13e-14 ✓ sig. |
| Edema | Hypotension | 0.093 | 10 | 8.68e-15 | 1.22e-13 ✓ sig. |
| Amphetamine or sympathomimetic abuse | Seizures | 0.063 | 13 | 2.02e-13 | 2.58e-12 ✓ sig. |
| Amnesia | Hypotension | 0.089 | 7 | 6.55e-13 | 8.02e-12 ✓ sig. |
| Edema | Hyperalgesia | 0.069 | 9 | 8.09e-12 | 8.95e-11 ✓ sig. |
| Amphetamine or sympathomimetic abuse | Dyskinesia, drug-induced | 0.069 | 6 | 6.19e-11 | 6.29e-10 ✓ sig. |
| Hyperkinesia | Hypotension | 0.074 | 7 | 8.36e-11 | 8.40e-10 ✓ sig. |
| Dyskinesia, drug-induced | Hyperkinesia | 0.114 | 5 | 9.74e-11 | 9.68e-10 ✓ sig. |
| Amphetamine or sympathomimetic abuse | Hyperkinesia | 0.067 | 7 | 2.28e-10 | 2.20e-9 ✓ sig. |
| Catalepsy | Dyskinesia, drug-induced | 0.143 | 4 | 1.05e-9 | 9.53e-9 ✓ sig. |
| Dyskinesia, drug-induced | Movement disorder | 0.074 | 5 | 1.70e-9 | 1.51e-8 ✓ sig. |
| Amnesia | Bradycardia | 0.098 | 4 | 1.92e-8 | 1.51e-7 ✓ sig. |
| Essential tremor | Movement disorder | 0.040 | 6 | 1.50e-6 | 8.52e-6 ✓ sig. |
| Bradycardia | Tremor | 0.077 | 3 | 1.92e-6 | 1.07e-5 ✓ sig. |
| Substance-induced psychosis | Tremor | 0.065 | 2 | 1.19e-4 | 3.93e-4 ✓ sig. |
| Cyp2d6 deficiency | Tremor | 0.063 | 1 | 9.74e-4 | 1.67e-3 ✓ sig. |
| Catatonia | Tremor | 0.063 | 1 | 9.74e-4 | 1.67e-3 ✓ sig. |
| immunodeficiency 92 | Tremor | 0.063 | 1 | 9.74e-4 | 1.67e-3 ✓ sig. |
| Amnesia | Retrograde amnesia | 0.053 | 1 | 1.17e-3 | 1.90e-3 ✓ sig. |
| Bradycardia | Cyp2d6 deficiency | 0.037 | 1 | 1.69e-3 | 2.53e-3 ✓ sig. |
| Bradycardia | Neurogenic bladder | 0.037 | 1 | 1.69e-3 | 2.53e-3 ✓ sig. |
| Bradyopsia | Dyskinesia, drug-induced | 0.059 | 1 | 1.95e-3 | 2.83e-3 ✓ sig. |
| Hyperkinesia | neurodevelopmental disorder with language impairment and behavioral abnormalities | 0.029 | 1 | 2.14e-3 | 3.04e-3 ✓ sig. |
| Bradyopsia | Substance-induced psychosis | 0.053 | 1 | 2.21e-3 | 3.11e-3 ✓ sig. |
| Essential tremor | neurodevelopmental disorder with cerebellar atrophy and motor dysfunction | 0.010 | 1 | 6.30e-3 | 7.56e-3 ✓ sig. |
| Seizures | seizures, early-onset, with neurodegeneration and brain calcifications | 0.007 | 1 | 9.16e-3 | 1.05e-2 ✓ sig. |