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Gene Gene information from NCBI Gene database.
Entrez ID 2534
Gene name FYN proto-oncogene, Src family tyrosine kinase
Gene symbol FYN
Synonyms (NCBI Gene)
SLKSYNp59-FYN
Chromosome 6
Chromosome location 6q21
Summary This gene is a member of the protein-tyrosine kinase oncogene family. It encodes a membrane-associated tyrosine kinase that has been implicated in the control of cell growth. The protein associates with the p85 subunit of phosphatidylinositol 3-kinase and
miRNA miRNA information provided by mirtarbase database.
33 Show/Hide all (33)
miRTarBase ID miRNA Experiments Reference
MIRT022048 hsa-miR-128-3p Microarray 17612493
MIRT038910 hsa-miR-93-3p CLASH 23622248
MIRT437821 hsa-miR-125a-3p Luciferase reporter assay 23606749
MIRT437821 hsa-miR-125a-3p Luciferase reporter assay 23606749
MIRT699208 hsa-miR-5580-3p HITS-CLIP 23313552
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
176 Show/Hide all (176)
GO ID Ontology Definition Evidence Reference
GO:0000166 Function Nucleotide binding IEA
GO:0000304 Process Response to singlet oxygen IEA
GO:0000304 Process Response to singlet oxygen ISS 27525436
GO:0001664 Function G protein-coupled receptor binding IEA
GO:0001664 Function G protein-coupled receptor binding IPI 23169819
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
137025 4037 ENSG00000010810
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P06241
Protein name Tyrosine-protein kinase Fyn (EC 2.7.10.2) (Proto-oncogene Syn) (Proto-oncogene c-Fyn) (Src-like kinase) (SLK) (p59-Fyn)
Protein function Non-receptor tyrosine-protein kinase that plays a role in many biological processes including regulation of cell growth and survival, cell adhesion, integrin-mediated signaling, cytoskeletal remodeling, cell motility, immune response and axon gu
PDB 1A0N , 1AOT , 1AOU , 1AVZ , 1AZG , 1EFN , 1FYN , 1G83 , 1M27 , 1NYF , 1NYG , 1SHF , 1ZBJ , 2DQ7 , 2MQI , 2MRJ , 2MRK , 3H0F , 3H0H , 3H0I , 3UA6 , 3UA7 , 4D8D , 4EIK , 4U17 , 4U1P , 4ZNX , 5ZAU , 6EDF , 6IPY , 6IPZ , 7A2J , 7A2K , 7A2L , 7A2M , 7A2N , 7A2O , 7A2P , 7A2Q , 7A2R , 7A2S , 7A2T , 7A2U , 7A2V , 7A2W , 7A2X , 7A2Y , 7A2Z , 7UD6 , 8KDX
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00017 SH2 149 → 231 SH2 domain Domain
PF00018 SH3_1 88 → 135 SH3 domain Domain
PF07714 PK_Tyr_Ser-Thr 271 → 520 Protein tyrosine and serine/threonine kinase Domain
Tissue specificity TISSUE SPECIFICITY: Isoform 1 is highly expressed in the brain. Isoform 2 is expressed in cells of hemopoietic lineages, especially T-lymphocytes. {ECO:0000269|PubMed:10196263}.
Sequence
Sequence length 537
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
KEGG Pathway Reactome Pathway
Sphingolipid signaling pathway GPVI-mediated activation cascade
Phospholipase D signaling pathway Signaling by ERBB2
Axon guidance PIP3 activates AKT signaling
Osteoclast differentiation Signaling by SCF-KIT
Focal adhesion Regulation of KIT signaling
Adherens junction Nef and signal transduction
Platelet activation Cell surface interactions at the vascular wall
Natural killer cell mediated cytotoxicity FCGR activation
T cell receptor signaling pathway PECAM1 interactions
Fc epsilon RI signaling pathway Constitutive Signaling by Aberrant PI3K in Cancer
Cholinergic synapse DAP12 signaling
Prion disease Nephrin family interactions
Pathogenic Escherichia coli infection NCAM signaling for neurite out-growth
Viral myocarditis CD28 co-stimulation
  CD28 dependent PI3K/Akt signaling
  CD28 dependent Vav1 pathway
  CTLA4 inhibitory signaling
  EPHB-mediated forward signaling
  EPHA-mediated growth cone collapse
  Ephrin signaling
  EPH-ephrin mediated repulsion of cells
  Sema3A PAK dependent Axon repulsion
  SEMA3A-Plexin repulsion signaling by inhibiting Integrin adhesion
  CRMPs in Sema3A signaling
  DCC mediated attractive signaling
  VEGFA-VEGFR2 Pathway
  Dectin-2 family
  CD209 (DC-SIGN) signaling
  RAF/MAP kinase cascade
  PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling
  Platelet Adhesion to exposed collagen
  Reelin signalling pathway
  NTRK2 activates RAC1
  Regulation of signaling by CBL
  FCGR3A-mediated IL10 synthesis
  FCGR3A-mediated phagocytosis
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
22
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
EBV-positive nodal T- and NK-cell lymphoma Pathogenic rs1351655525, rs370573757 RCV004560282
RCV004560283
RCV004560284
★★★★★
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Show/Hide Unknown Diseases (21)
Phenotype Name Clinical Significance Source Reference Evidence Score
ALZHEIMERS DISEASE — Disgenet —
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ANDROGENETIC ALOPECIA — GWAS catalog 28196072, 30573740
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ATOPIC ECZEMA — GWAS catalog 25574825
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
AUTOIMMUNE THYROID DISEASE — GWAS catalog 32581359, 37002690
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Show/Hide Text Mining Associations (132)
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Adenocarcinoma Adenocarcinoma BEFREE 17943724
★★★★★
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of prostate Prostate adenocarcinoma BEFREE 17943724
★★★★★
★☆☆☆☆
Found in Text Mining only
Adenoma Adenoma BEFREE 2121537
★★★★★
★☆☆☆☆
Found in Text Mining only
Adult T-Cell Lymphoma/Leukemia T-Cell Lymphoma/Leukemia CTD_human_DG 26437031
★★★★★
★☆☆☆☆
Found in Text Mining only
Adult T-Cell Lymphoma/Leukemia T-Cell Lymphoma/Leukemia BEFREE 28978570
★★★★★
★☆☆☆☆
Found in Text Mining only
Alveolitis, Fibrosing Alveolitis CTD_human_DG 30658076
★★★★★
★☆☆☆☆
Found in Text Mining only
Alzheimer Disease Alzheimer disease Pubtator 22927204, 28033507, 32751526, 35563596, 36258016 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Amyloidosis Amyloidosis BEFREE 29467305, 30549331
★★★★★
★☆☆☆☆
Found in Text Mining only
Aneuploidy Aneuploidy Pubtator 19404734 Associate
★★★★★
★☆☆☆☆
Found in Text Mining only
Angioimmunoblastic Lymphadenopathy Angioimmunoblastic T-cell lymphoma BEFREE 27177312
★★★★★
★☆☆☆☆
Found in Text Mining only