Disease Clusters?
Groups of diseases that share a large number of curated genes with each other, computed via label propagation over the shared-gene similarity graph. See also Shared-Gene Disease Pairs for pairwise comparisons.
← Back to all clusters
Cluster 2
143
Diseases
7,021
Unique genes
0.439
Avg. similarity score
Plasma cell myeloma
Most-connected disease (52 links)
Disease
Searched: Hypotaurinemic retinal degeneration and cardiomyopathy
Pinned (dragged)
Node size = connections within this cluster · edge thickness = similarity strength · hover an edge for its details ·
click a node to select it and show its pairs below (double-click or Ctrl/⌘-click opens the disease page) ·
drag a node to pin it in place · scroll/pinch to zoom.
Hypotaurinemic retinal degeneration and cardiomyopathy
Plasma cell myeloma
Rectum adenocarcinoma
Colon adenocarcinoma
Bile duct cancer
Transitional cell carcinoma
Superficial spreading melanoma
Gastric intestinal type adenocarcinoma
Nodular malignant melanoma
Ductal carcinoma of breast
Thyroid carcinoma
Cecum adenocarcinoma
Undifferentiated pleomorphic sarcoma
Duodenal adenocarcinoma
Central nervous system primitive neuroectodermal neoplasm
B-cell chronic lymphocytic leukemia
Gastric adenoma
Richter transformation
Meningioma
Small cell carcinoma
Peripheral primitive neuroectodermal tumor
Anaplastic astrocytoma
Brain stem glioblastoma
Carcinoma of the ampulla of vater
Ependymoma
Gastresophageal junction adenocarcinoma
Her2 positive breast carcinoma
Placental choriocarcinoma
Astrocytoma (excluding glioblastoma)
Mantle cell lymphoma
Lung cancer
Colorectal cancer
Acute myeloid leukemia
Angiosarcoma
B-cell prolymphocytic leukemia
Eccrine porocarcinoma
Extramammary paget disease
Pancreatic acinar cell carcinoma
Parathyroid carcinoma
Small intestinal tubulovillous adenoma
Glioblastoma
Anaplastic (malignant) meningioma
Gastric neuroendocrine tumor g1
Gastrointestinal stromal tumor
Large cell carcinoma
Lentigo maligna melanoma
Ovarian serous carcinoma
Squamous cell carcinoma
Carcinoma
Acral lentiginous melanoma
Astrocytoma
Basal cell carcinoma
Burkitt lymphoma
Childhood kidney wilms tumor
Colonic neoplasms
Diffuse large b-cell lymphoma
Endometrial hyperplasia
Hepatocellular carcinoma
Non-small cell lung carcinoma
Prostate cancer
Prostatic neoplasms
Rectal tubular adenoma
Retinoblastoma
Rhabdomyosarcoma
Skin cancer
T-cell large granular lymphocyte leukemia
Breast cancer
Central nervous system cancer
Chromophobe renal cell carcinoma
Clear cell renal cell carcinoma
Digestive system melanoma
Esophageal squamous cell carcinoma
Hemangioblastoma
Oral cavity carcinoma
Pancreatic ductal carcinoma
Papillary renal cell carcinoma
Polycystic ovary syndrome
Glioma
Melanoma
Acinar lung adenocarcinoma
Adenoid cystic carcinoma
Adenosquamous lung carcinoma
Anaplastic lung carcinoma
B-cell acute lymphoblastic leukemia
Breast neoplasms
Chondroblastoma
Diffuse gastric adenocarcinoma
Esophageal adenocarcinoma
Female breast carcinoma
Gallbladder neoplasms
Gastric cancer
Gliomatosis cerebri
Hodgkin lymphoma
Medulloblastoma
Osteosarcoma
Primary central nervous system lymphoma
Rectal tubulovillous adenoma
Renal pelvis urothelial carcinoma
Rhabdoid tumor
Skin neoplasms
Small cell lung carcinoma
T-cell acute lymphoblastic leukemia
T-cell leukemia-lymphoma
T-cell prolymphocytic leukemia
Urinary bladder cancer
Uterine fibroid
Desbuquois syndrome
Amelanotic skin melanoma
Cecum villous adenoma
Endometrial serous adenocarcinoma
Endometriosis
Gallbladder adenoma
Gallbladder biliary intraepithelial neoplasia
Liposarcoma
Lymphoblastic leukemia
Myelodysplastic syndrome
Oligodendroglioma
Osteoblastoma
Plasmacytoma
Stomach neoplasms
Villous adenoma of colon
Adrenal cortex adenoma
Androgenetic alopecia
Myeloid leukemia
Neoplasms
Prostatic adenoma
Signet ring cell gastric adenocarcinoma
Thyroid gland oncocytic follicular carcinoma
Systemic lupus erythematosus 18
Global developmental delay, absent or hypoplastic corpus callosum, and dysmorphic facies
Kidney cancer
Short stature, dauber-argente type
Acantholytic blistering of oral and laryngeal mucosa
Faundes-banka syndrome
C3hex olfactory ability
Neurodevelopmental disorder with hypotonia, facial dysmorphism, and brain abnormalities
colorectal adenocarcinoma
cutaneous melanoma
Guillouet-gordon syndrome
Intellectual developmental disorder seizures polymicrogyria
Isobutyryl-coa dehydrogenase deficiency
Neurodevelopmental disorder with hypotonia, neuropathy, and deafness
Microcornea, rod-cone dystrophy, cataract, and posterior staphyloma 1
Member diseases (most connected first ‐ the cluster's core)
Top shared genes (genes linked to 2+ member diseases ‐ top 100 shown, download for all)
| Gene ⇵ | Member diseases ⇵ | Linked diseases |
|---|---|---|
| TP53 | 109 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 105 more |
| LRP1B | 107 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 103 more |
| ATM | 104 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 100 more |
| CSMD3 | 104 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 100 more |
| KMT2C | 103 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 99 more |
| ZFHX3 | 102 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adrenal cortex adenoma and 98 more |
| CTNNA2 | 100 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adenosquamous lung carcinoma and 96 more |
| KRAS | 99 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 95 more |
| MUC16 | 99 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 95 more |
| KMT2D | 98 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 94 more |
| APC | 97 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adenosquamous lung carcinoma and 93 more |
| FAT3 | 97 / 143 | Acinar lung adenocarcinoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adenosquamous lung carcinoma and 93 more |
| NRG1 | 97 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Anaplastic (malignant) meningioma and 93 more |
| DCC | 95 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenosquamous lung carcinoma, Adrenal cortex adenoma and 91 more |
| MUC4 | 95 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 91 more |
| FAT4 | 94 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adenosquamous lung carcinoma and 90 more |
| NF1 | 94 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adrenal cortex adenoma and 90 more |
| ARID1A | 93 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adenosquamous lung carcinoma and 89 more |
| BRAF | 93 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 89 more |
| CREBBP | 93 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adenosquamous lung carcinoma and 89 more |
| EP300 | 93 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adenosquamous lung carcinoma and 89 more |
| ERBB4 | 93 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adrenal cortex adenoma and 89 more |
| FAT1 | 93 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 89 more |
| MTOR | 93 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adenosquamous lung carcinoma and 89 more |
| NBEA | 93 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 89 more |
| NOTCH1 | 93 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adenosquamous lung carcinoma and 89 more |
| PTPRD | 93 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 89 more |
| CNTNAP2 | 92 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Amelanotic skin melanoma and 88 more |
| EGFR | 92 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 88 more |
| PIK3CA | 92 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 88 more |
| TET2 | 92 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 88 more |
| BRCA2 | 91 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 87 more |
| CDKN2A | 91 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adenosquamous lung carcinoma and 87 more |
| NCOR1 | 91 / 143 | Acinar lung adenocarcinoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adenosquamous lung carcinoma and 87 more |
| PTEN | 91 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Amelanotic skin melanoma and 87 more |
| PTPRT | 91 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Anaplastic (malignant) meningioma, Anaplastic astrocytoma and 87 more |
| RB1 | 91 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 87 more |
| SETD2 | 91 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adenosquamous lung carcinoma and 87 more |
| ALK | 90 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 86 more |
| NOTCH2 | 90 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adenosquamous lung carcinoma and 86 more |
| BCOR | 89 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 85 more |
| CUX1 | 89 / 143 | Acute myeloid leukemia, Adenoid cystic carcinoma, Adrenal cortex adenoma, Amelanotic skin melanoma and 85 more |
| MET | 89 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 85 more |
| NCOR2 | 89 / 143 | Acute myeloid leukemia, Adenoid cystic carcinoma, Anaplastic (malignant) meningioma, Anaplastic astrocytoma and 85 more |
| ROS1 | 89 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 85 more |
| BIRC6 | 88 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 84 more |
| ASXL1 | 87 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Anaplastic (malignant) meningioma and 83 more |
| ERG | 87 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Amelanotic skin melanoma, Anaplastic (malignant) meningioma and 83 more |
| FBXO11 | 87 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adrenal cortex adenoma and 83 more |
| KMT2A | 87 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adrenal cortex adenoma and 83 more |
| POLE | 87 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adrenal cortex adenoma, Anaplastic (malignant) meningioma and 83 more |
| SPEN | 87 / 143 | Acinar lung adenocarcinoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adenosquamous lung carcinoma and 83 more |
| CACNA1D | 86 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Amelanotic skin melanoma and 82 more |
| CTNND2 | 86 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adenosquamous lung carcinoma and 82 more |
| ERBB2 | 86 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Anaplastic (malignant) meningioma and 82 more |
| GNAS | 86 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adrenal cortex adenoma and 82 more |
| NTRK3 | 86 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 82 more |
| ROBO2 | 86 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenosquamous lung carcinoma, Anaplastic (malignant) meningioma and 82 more |
| TERT | 86 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Anaplastic (malignant) meningioma, Anaplastic astrocytoma and 82 more |
| ARID1B | 85 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Amelanotic skin melanoma and 81 more |
| ATRX | 85 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adrenal cortex adenoma and 81 more |
| KDM6A | 85 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adenosquamous lung carcinoma and 81 more |
| ESR1 | 84 / 143 | Acute myeloid leukemia, Amelanotic skin melanoma, Anaplastic (malignant) meningioma, Anaplastic astrocytoma and 80 more |
| MECOM | 84 / 143 | Acral lentiginous melanoma, Adenosquamous lung carcinoma, Amelanotic skin melanoma, Anaplastic (malignant) meningioma and 80 more |
| SMARCA4 | 84 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Anaplastic (malignant) meningioma and 80 more |
| AR | 83 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Adenosquamous lung carcinoma, Anaplastic (malignant) meningioma and 79 more |
| CTNNB1 | 83 / 143 | Acral lentiginous melanoma, Adenoid cystic carcinoma, Adrenal cortex adenoma, Amelanotic skin melanoma and 79 more |
| ERBB3 | 83 / 143 | Acral lentiginous melanoma, Adenoid cystic carcinoma, Anaplastic (malignant) meningioma, Anaplastic astrocytoma and 79 more |
| FBXW7 | 83 / 143 | Acute myeloid leukemia, Adenoid cystic carcinoma, Amelanotic skin melanoma, Anaplastic (malignant) meningioma and 79 more |
| PTPN13 | 83 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adrenal cortex adenoma and 79 more |
| TNRC18 | 83 / 143 | Acral lentiginous melanoma, Adenoid cystic carcinoma, Adenosquamous lung carcinoma, Anaplastic astrocytoma and 79 more |
| CAMTA1 | 82 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Amelanotic skin melanoma and 78 more |
| FAM135B | 82 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Anaplastic (malignant) meningioma and 78 more |
| MSH6 | 82 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adrenal cortex adenoma and 78 more |
| NTRK1 | 82 / 143 | Acral lentiginous melanoma, Adenoid cystic carcinoma, Adenosquamous lung carcinoma, Amelanotic skin melanoma and 78 more |
| SETBP1 | 82 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Anaplastic (malignant) meningioma, Anaplastic astrocytoma and 78 more |
| TRRAP | 82 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 78 more |
| AKAP9 | 81 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Adenoid cystic carcinoma, Adenosquamous lung carcinoma and 77 more |
| ARID2 | 81 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Anaplastic (malignant) meningioma and 77 more |
| ATR | 81 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Amelanotic skin melanoma and 77 more |
| BRCA1 | 81 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adenosquamous lung carcinoma and 77 more |
| CDK12 | 81 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 77 more |
| KAT6B | 81 / 143 | Acute myeloid leukemia, Adenoid cystic carcinoma, Adrenal cortex adenoma, Amelanotic skin melanoma and 77 more |
| KDR | 81 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Anaplastic (malignant) meningioma and 77 more |
| MUC6 | 81 / 143 | Acinar lung adenocarcinoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Anaplastic (malignant) meningioma and 77 more |
| PLEC | 81 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adrenal cortex adenoma and 77 more |
| PTPRK | 81 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Anaplastic (malignant) meningioma and 77 more |
| TP63 | 81 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Adrenal cortex adenoma and 77 more |
| ASPM | 80 / 143 | Acral lentiginous melanoma, Adenoid cystic carcinoma, Anaplastic astrocytoma, B-cell chronic lymphocytic leukemia and 76 more |
| BCORL1 | 80 / 143 | Acinar lung adenocarcinoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Anaplastic astrocytoma and 76 more |
| CHD4 | 80 / 143 | Acute myeloid leukemia, Adenoid cystic carcinoma, Anaplastic (malignant) meningioma, Anaplastic astrocytoma and 76 more |
| COL3A1 | 80 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenosquamous lung carcinoma, Anaplastic astrocytoma and 76 more |
| EPHA3 | 80 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Anaplastic (malignant) meningioma, Anaplastic astrocytoma and 76 more |
| FGFR3 | 80 / 143 | Acute myeloid leukemia, Adenoid cystic carcinoma, Anaplastic (malignant) meningioma, Anaplastic astrocytoma and 76 more |
| FLNA | 80 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma and 76 more |
| KAT6A | 80 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Amelanotic skin melanoma and 76 more |
| NSD1 | 80 / 143 | Acinar lung adenocarcinoma, Acute myeloid leukemia, Adenoid cystic carcinoma, Anaplastic astrocytoma and 76 more |
| NTRK2 | 80 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Amelanotic skin melanoma, Anaplastic (malignant) meningioma and 76 more |
| PREX2 | 80 / 143 | Acral lentiginous melanoma, Acute myeloid leukemia, Amelanotic skin melanoma, Anaplastic (malignant) meningioma and 76 more |
| PTCH1 | 80 / 143 | Acinar lung adenocarcinoma, Acral lentiginous melanoma, Acute myeloid leukemia, Angiosarcoma and 76 more |
What do these columns mean?
- Connections in cluster
- How many other members this disease has a shared-gene link to (the node size in the network above). The most-connected diseases are the cluster's core.
- Significant partners
- How many of those links are statistically significant (FDR q < 0.05).
- Curated genes
- Distinct curated genes linked to that disease in GeDiPNet.
- Member diseases (Top shared genes)
- How many of this cluster's diseases are linked to the gene, out of the cluster's total. Genes shared by many members are the most direct explanation of why they group together.
- Overlap genes (x / y)
- x = genes shared between this cluster and the pathway/GO term; y = that pathway/GO term's total gene count. A higher x relative to y (and to the cluster's own size) means a tighter biological match.
- Cluster gene count
- Total distinct genes across every disease in this cluster -- the "n" used in the significance test below.
- Fold enrichment
- Observed overlap divided by the overlap expected by chance, given the cluster's gene count, the pathway/term's size and the gene universe tested. 5× means five times more shared genes than random. Tells strong hits apart when q-values are all vanishingly small.
- P-value / FDR q-value
- Is this pathway/GO term's overlap with the cluster more than chance? Upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pathway/term (prefer the q-value -- it accounts for testing many at once).
- Shared genes (Pairs within this cluster)
- Number of curated genes the two diseases in that row have in common.
- Similarity score (Pairs within this cluster)
- Jaccard-based gene overlap between the two specific diseases in that row -- same metric as the main Shared-Gene Disease Pairs page.
Enriched Pathways (why this cluster is grouped, biologically)
| Pathway ⇵ | Source ⇵ | Overlap genes ⇵ | Fold enrichment ⇵ | P-value ⇵ | FDR q-value ⇵ |
|---|---|---|---|---|---|
| Prostate cancer | KEGG | 91 / 98 | 1.6× | 1.65e-14 | 4.50e-12 ✓ sig. |
| Pathways in cancer | KEGG | 387 / 533 | 1.2× | 2.76e-12 | 4.72e-10 ✓ sig. |
| Pancreatic cancer | KEGG | 72 / 77 | 1.6× | 3.90e-12 | 6.50e-10 ✓ sig. |
| Colorectal cancer | KEGG | 79 / 87 | 1.6× | 2.00e-11 | 2.84e-9 ✓ sig. |
| EGFR tyrosine kinase inhibitor resistance | KEGG | 72 / 80 | 1.5× | 4.44e-10 | 4.48e-8 ✓ sig. |
| Melanoma | KEGG | 65 / 73 | 1.5× | 9.20e-9 | 6.85e-7 ✓ sig. |
| Non-small cell lung cancer | KEGG | 65 / 73 | 1.5× | 9.20e-9 | 6.85e-7 ✓ sig. |
| Transcriptional misregulation in cancer | KEGG | 153 / 198 | 1.3× | 1.57e-8 | 1.11e-6 ✓ sig. |
| Chronic myeloid leukemia | KEGG | 67 / 77 | 1.5× | 4.63e-8 | 2.85e-6 ✓ sig. |
| Acute myeloid leukemia | KEGG | 60 / 68 | 1.5× | 7.64e-8 | 4.42e-6 ✓ sig. |
| Bladder cancer | KEGG | 39 / 41 | 1.6× | 1.18e-7 | 6.47e-6 ✓ sig. |
| Proteoglycans in cancer | KEGG | 154 / 204 | 1.3× | 2.15e-7 | 1.09e-5 ✓ sig. |
| Endocrine resistance | KEGG | 81 / 99 | 1.4× | 5.80e-7 | 2.59e-5 ✓ sig. |
| Endometrial cancer | KEGG | 52 / 59 | 1.5× | 6.34e-7 | 2.81e-5 ✓ sig. |
| AGE-RAGE signaling pathway in diabetic complications | KEGG | 82 / 101 | 1.4× | 9.31e-7 | 3.92e-5 ✓ sig. |
Enriched GO Terms (Biological Process, a second line of biological evidence)
| GO term ⇵ | GO ID ⇵ | Overlap genes ⇵ | Fold enrichment ⇵ | P-value ⇵ | FDR q-value ⇵ |
|---|---|---|---|---|---|
| positive regulation of transcription by RNA polymerase II | GO:0045944 | 726 / 1,208 | 1.6× | 1.72e-60 | 6.55e-56 ✓ sig. |
| positive regulation of DNA-templated transcription | GO:0045893 | 458 / 778 | 1.6× | 8.70e-35 | 6.49e-31 ✓ sig. |
| negative regulation of transcription by RNA polymerase II | GO:0000122 | 544 / 1,002 | 1.4× | 1.84e-28 | 9.62e-25 ✓ sig. |
| positive regulation of gene expression | GO:0010628 | 310 / 504 | 1.6× | 2.53e-28 | 1.27e-24 ✓ sig. |
| cell population proliferation | GO:0008283 | 178 / 263 | 1.8× | 2.27e-23 | 5.80e-20 ✓ sig. |
| negative regulation of apoptotic process | GO:0043066 | 307 / 524 | 1.6× | 4.10e-23 | 1.01e-19 ✓ sig. |
| positive regulation of cell population proliferation | GO:0008284 | 309 / 532 | 1.5× | 1.98e-22 | 4.44e-19 ✓ sig. |
| negative regulation of DNA-templated transcription | GO:0045892 | 350 / 631 | 1.5× | 1.39e-20 | 2.42e-17 ✓ sig. |
| skeletal system development | GO:0001501 | 111 / 151 | 2.0× | 2.29e-19 | 3.34e-16 ✓ sig. |
| positive regulation of MAPK cascade | GO:0043410 | 150 / 224 | 1.8× | 3.11e-19 | 4.44e-16 ✓ sig. |
| positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction | GO:0051897 | 143 / 217 | 1.8× | 1.84e-17 | 2.07e-14 ✓ sig. |
| cell migration | GO:0016477 | 186 / 303 | 1.6× | 2.33e-17 | 2.54e-14 ✓ sig. |
| intracellular signal transduction | GO:0035556 | 266 / 471 | 1.5× | 2.90e-17 | 3.09e-14 ✓ sig. |
| animal organ morphogenesis | GO:0009887 | 94 / 130 | 1.9× | 7.66e-16 | 6.39e-13 ✓ sig. |
| embryonic limb morphogenesis | GO:0030326 | 52 / 59 | 2.3× | 9.67e-16 | 7.95e-13 ✓ sig. |