Gene Gene information from NCBI Gene database.
Entrez ID 2778
Gene name GNAS complex locus
Gene symbol GNAS
Synonyms (NCBI Gene)
AHOAIMAH1C20orf45GNAS1GPSAGSAGSPNESPPITA3POHSCG6SgVI
Chromosome 20
Chromosome location 20q13.32
Summary This locus has a highly complex imprinted expression pattern. It gives rise to maternally, paternally, and biallelically expressed transcripts that are derived from four alternative promoters and 5` exons. Some transcripts contain a differentially methyla
SNPs SNP information provided by dbSNP.
53
SNP ID Visualize variation Clinical significance Consequence
rs11554273 C>A,G,T Likely-pathogenic, pathogenic Missense variant, non coding transcript variant, genic downstream transcript variant, coding sequence variant, 3 prime UTR variant
rs111541229 G>C,T Likely-pathogenic Splice donor variant, intron variant
rs113029858 G>C,T Pathogenic Genic downstream transcript variant, splice donor variant
rs121913494 A>G,T Likely-pathogenic, pathogenic Coding sequence variant, genic downstream transcript variant, 3 prime UTR variant, downstream transcript variant, non coding transcript variant, missense variant
rs121913495 G>A,T Likely-pathogenic, pathogenic Coding sequence variant, genic downstream transcript variant, 3 prime UTR variant, non coding transcript variant, missense variant
miRNA miRNA information provided by mirtarbase database.
310
miRTarBase ID miRNA Experiments Reference
MIRT020904 hsa-miR-155-5p Proteomics 18668040
MIRT052019 hsa-let-7b-5p CLASH 23622248
MIRT051047 hsa-miR-17-5p CLASH 23622248
MIRT044478 hsa-miR-320a CLASH 23622248
MIRT044478 hsa-miR-320a CLASH 23622248
Transcription factors Transcription factors information provided by TRRUST V2 database.
2
Transcription factor Regulation Reference
GATA1 Unknown 11418466
YY1 Unknown 18458536
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
90
GO ID Ontology Definition Evidence Reference
GO:0000166 Function Nucleotide binding IEA
GO:0001726 Component Ruffle IEA
GO:0002862 Process Negative regulation of inflammatory response to antigenic stimulus TAS
GO:0003091 Process Renal water homeostasis TAS
GO:0003924 Function GTPase activity IBA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
139320 4392 ENSG00000087460
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
O95467
Protein name Neuroendocrine secretory protein 55 (NESP55) [Cleaved into: LHAL tetrapeptide; GPIPIRRH peptide]
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF06390 NESP55 1 245 Neuroendocrine-specific golgi protein P55 (NESP55) Family
Sequence
Sequence length 245
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P63092
Protein name Guanine nucleotide-binding protein G(s) subunit alpha isoforms short (EC 3.6.5.-) (Adenylate cyclase-stimulating G alpha protein)
Protein function Guanine nucleotide-binding proteins (G proteins) function as transducers in numerous signaling pathways controlled by G protein-coupled receptors (GPCRs) (PubMed:12391161, PubMed:17110384, PubMed:21488135, PubMed:26206488, PubMed:8702665, PubMed
PDB 5G53 , 5UZ7 , 5VAI , 6AU6 , 6B3J , 6E3Y , 6E67 , 6EG8 , 6GDG , 6LI3 , 6LMK , 6LPB , 6M1H , 6M1I , 6NI3 , 6NIY , 6ORV , 6P9X , 6P9Y , 6PB0 , 6PB1 , 6UUN , 6UUS , 6UVA , 6VCB , 6VN7 , 6WHC , 6WI9 , 6WPW , 6WZG , 6X18 , 6X19 , 6X1A , 6XOX , 7AUE , 7BB6 , 7BB7 , 7BPH , 7BW0 , 7BZ2 , 7C2E , 7CFM , 7CFN , 7CKW , 7CKX , 7CKY , 7CKZ , 7CRH , 7CX2 , 7CX3 , 7CX4
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00503 G-alpha 20 383 G-protein alpha subunit Domain
Sequence
Sequence length 394
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P84996
Protein name Protein ALEX (Alternative gene product encoded by XL-exon)
Protein function May inhibit the adenylyl cyclase-stimulating activity of guanine nucleotide-binding protein G(s) subunit alpha which is produced from the same locus in a different open reading frame.
Family and domains
Sequence
MMARPVDPQRSPDPTFRSSTRHSGKLEPMEATAHLLRKQCPSRLNSPAWEASGLHWSSLD
SPVGSMQALRPSAQHSWSPEPSVVPDQAWEDTALHQKKLCPLSLTSLPREAAVNFSYRSQ
TLLQEAQVLQGSPELLPRSPKPSGLQRLAPEEATALPLRRLCHLSLMEKDLGTTAHPRGF
PELSHKSTAAASSRQSRPRVRSASLPPRTRLPSGSQAPSAAHPKRLSDLLLTSRAAAPGW
RSPDPRSRLAAPPLGSTTLPSTWTAPQSRLTARPSRSPEPQIRESEQRDPQLRRKQQRWK
EPLMPRREEKYPLRGTDPLPPGQPQRIPLPGQPLQPQPILTPGQPQKIPTPGQHQPILTP
GHSQPIPTPGQPLPPQPIPTPGRPLTPQPIPTPGRPLTPQPIQMPGRPLRLPPPLRLLRP
GQPMSPQLRQTQGLPLPQPLLPPGQPKSAGRPLQPLPPGPDARSISDPPAPRSRLPIRLL
RGLLARLPGGASPRAAAAAACTTMKGWPAATMTPAETSPTMGPPDASAGFSIGEIAAAES
PSATYSATFSCKPSGAASVDLRVPSPKPRALSRSRRYPWRRSADRCAKKPWRSGPRSAQR
RNAVSSSTNNSRTKRWATCVRTACCF
Sequence length 626
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q5JWF2
Protein name Guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas (EC 3.6.5.-) (Adenylate cyclase-stimulating G alpha protein) (Extra large alphas protein) (XLalphas)
Protein function Guanine nucleotide-binding proteins (G proteins) function as transducers in numerous signaling pathways controlled by G protein-coupled receptors (GPCRs). The alpha chain contains the guanine nucleotide binding site and alternates between an act
PDB 8I2G , 8JHB , 8JHI , 8WW2 , 9BKK , 9J1P
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00503 G-alpha 663 1026 G-protein alpha subunit Domain
Sequence
MGVRNCLYGNNMSGQRDIPPEIGEQPEQPPLEAPGAAAPGAGPSPAEEMETEPPHNEPIP
VENDGEACGPPEVSRPNFQVLNPAFREAGAHGSYSPPPEEAMPFEAEQPSLGGFWPTLEQ
PGFPSGVHAGLEAFGPALMEPGAFSGARPGLGGYSPPPEEAMPFEFDQPAQRGCSQLLLQ
VPDLAPGGPGAAGVPGAPPEEPQALRPAKAGSRGGYSPPPEETMPFELDGEGFGDDSPPP
GLSRVIAQVDGSSQFAAVAASSAVRLTPAANAPPLWVPGAIGSPSQEAVRPPSNFTGSSP
WMEISGPPFEIGSAPAGVDDTPVNMDSPPIALDGPPIKVSGAPDKRERAERPPVEEEAAE
MEGAADAAEGGKVPSPGYGSPAAGAASADTAARAAPAAPADPDSGATPEDPDSGTAPADP
DSGAFAADPDSGAAPAAPADPDSGAAPDAPADPDSGAAPDAPADPDAGAAPEAPAAPAAA
ETRAAHVAPAAPDAGAPTAPAASATRAAQVRRAASAAPASGARRKIHLRPPSPEIQAADP
PTPRPTRASAWRGKSESSRGRRVYYDEGVASSDDDSSGDESDDGTSGCLRWFQHRRNRRR
RKPQRNLLRNFLVQAFGGCFGRSESPQPKASRSLKVKKVPLAEKRRQMRKEALEKRAQKR
AEKKRSKLIDKQLQDEKMGYMCTHRLLLLGAGESGKSTIVKQMRILHVNGFNGEGGEEDP
QAARSNSDGEKATKVQDIKNNLKEAIETIVAAMSNLVPPVELANPENQFRVDYILSVMNV
PDFDFPPEFYEHAKALWEDEGVRACYERSNEYQLIDCAQYFLDKIDVIKQADYVPSDQDL
LRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVI
REDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDYFPEFAR
YTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFN
DCRDII
QRMHLRQYELL
Sequence length 1037
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
75
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
ACTH-independent macronodular adrenal hyperplasia 1 Likely pathogenic; Pathogenic rs11554273, rs121913495 RCV004558264
RCV004558265
RCV004558266
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Albright hereditary osteodystrophy, pseudohypoparathyroidism, pseudopseudohypoparathyroidism, acrodysostosis and osteoma cutis Pathogenic; Likely pathogenic rs797045046, rs2516794697 RCV006436695
RCV006437221
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Disorders of GNAS Inactivation Likely pathogenic; Pathogenic rs2517261214, rs587776829, rs1085307719 RCV003389351
RCV003389234
RCV003389328
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Embryonal rhabdomyosarcoma Likely pathogenic; Pathogenic rs121913495 RCV006253625
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Acute myeloid leukemia Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BRACHYDACTYLY CTD, Disgenet
CTD, Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CAFE-AU-LAIT SPOTS CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Cervical cancer Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acrodysostosis Acrodysostosis BEFREE 22723333
★☆☆☆☆
Found in Text Mining only
Acrodysostosis Acrodysostosis Pubtator 31041856, 9039990 Associate
★☆☆☆☆
Found in Text Mining only
Acromegaly Acromegaly BEFREE 11158006, 11254676, 1904395, 21778740, 28540626
★☆☆☆☆
Found in Text Mining only
Acromegaly Acromegaly CTD_human_DG 11254676
★☆☆☆☆
Found in Text Mining only
Acromegaly Acromegaly Pubtator 11254676, 16543670, 17878646, 22564667, 33752302, 34282806, 36435867, 36497102 Associate
★☆☆☆☆
Found in Text Mining only
Acth-Independent Macronodular Adrenal Hyperplasia Cushing`s Syndrome ORPHANET_DG 12727968
★☆☆☆☆
Found in Text Mining only
Acth-Independent Macronodular Adrenal Hyperplasia Cushing`s Syndrome UNIPROT_DG 12727968
★☆☆☆☆
Found in Text Mining only
Acth-Independent Macronodular Adrenal Hyperplasia Cushing`s Syndrome GENOMICS_ENGLAND_DG 9328353
★☆☆☆☆
Found in Text Mining only
Acth-Independent Macronodular Adrenal Hyperplasia Cushing`s Syndrome CTD_human_DG
★☆☆☆☆
Found in Text Mining only
Acth-Independent Macronodular Adrenal Hyperplasia Cushing`s Syndrome CLINVAR_DG
★☆☆☆☆
Found in Text Mining only