Gene Gene information from NCBI Gene database.
Entrez ID 3728
Gene name Junction plakoglobin
Gene symbol JUP
Synonyms (NCBI Gene)
CTNNGDP3DPIIIPDGBPGPKGB
Chromosome 17
Chromosome location 17q21.2
Summary This gene encodes a major cytoplasmic protein which is the only known constituent common to submembranous plaques of both desmosomes and intermediate junctions. This protein forms distinct complexes with cadherins and desmosomal cadherins and is a member
SNPs SNP information provided by dbSNP.
21
SNP ID Visualize variation Clinical significance Consequence
rs113994176 CTG>-,CTGCTG Pathogenic, uncertain-significance Inframe insertion, coding sequence variant, inframe deletion
rs113994177 CA>- Pathogenic Coding sequence variant, frameshift variant
rs193922705 G>A,T Conflicting-interpretations-of-pathogenicity, likely-benign, uncertain-significance, benign-likely-benign, benign Intron variant
rs199826380 C>T Conflicting-interpretations-of-pathogenicity, likely-benign Missense variant, coding sequence variant
rs200740462 G>A Conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
315
miRTarBase ID miRNA Experiments Reference
MIRT016884 hsa-miR-335-5p Microarray 18185580
MIRT020514 hsa-miR-155-5p Proteomics 18668040
MIRT022247 hsa-miR-124-3p Proteomics;Microarray 18668037
MIRT023549 hsa-miR-1-3p Proteomics;Microarray 18668037
MIRT028441 hsa-miR-30a-5p Proteomics 18668040
Transcription factors Transcription factors information provided by TRRUST V2 database.
1
Transcription factor Regulation Reference
DNMT3A Unknown 17998942
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
89
GO ID Ontology Definition Evidence Reference
GO:0001533 Component Cornified envelope IEA
GO:0001533 Component Cornified envelope TAS
GO:0001954 Process Positive regulation of cell-matrix adhesion IGI 28115160
GO:0002159 Process Desmosome assembly IDA 9049256
GO:0002159 Process Desmosome assembly IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
173325 6207 ENSG00000173801
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P14923
Protein name Junction plakoglobin (Catenin gamma) (Desmoplakin III) (Desmoplakin-3)
Protein function Common junctional plaque protein. The membrane-associated plaques are architectural elements in an important strategic position to influence the arrangement and function of both the cytoskeleton and the cells within the tissue. The presence of p
PDB 3IFQ
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00514 Arm 215 254 Armadillo/beta-catenin-like repeat Repeat
PF00514 Arm 341 381 Armadillo/beta-catenin-like repeat Repeat
PF00514 Arm 573 613 Armadillo/beta-catenin-like repeat Repeat
Tissue specificity TISSUE SPECIFICITY: Expressed in the heart (at protein level). {ECO:0000269|PubMed:33784018}.
Sequence
MEVMNLMEQPIKVTEWQQTYTYDSGIHSGANTCVPSVSSKGIMEEDEACGRQYTLKKTTT
YTQGVPPSQGDLEYQMSTTARAKRVREAMCPGVSGEDSSLLLATQVEGQATNLQRLAEPS
QLLKSAIVHLINYQDDAELATRALPELTKLLNDEDPVVVTKAAMIVNQLSKKEASRRALM
GSPQLVAAVVRTMQNTSDLDTARCTTSILHNLSHHREGLLAIFKSGGIPALVRMLSSPVE
SVLFYAITTLHNLL
LYQEGAKMAVRLADGLQKMVPLLNKNNPKFLAITTDCLQLLAYGNQ
ESKLIILANGGPQALVQIMRNYSYEKLLWTTSRVLKVLSVCPSNKPAIVEAGGMQALGKH
LTSNSPRLVQNCLWTLRNLSD
VATKQEGLESVLKILVNQLSVDDVNVLTCATGTLSNLTC
NNSKNKTLVTQNSGVEALIHAILRAGDKDDITEPAVCALRHLTSRHPEAEMAQNSVRLNY
GIPAIVKLLNQPNQWPLVKATIGLIRNLALCPANHAPLQEAAVIPRLVQLLVKAHQDAQR
HVAAGTQQPYTDGVRMEEIVEGCTGALHILARDPMNRMEIFRLNTIPLFVQLLYSSVENI
QRVAAGVLCELAQ
DKEAADAIDAEGASAPLMELLHSRNEGTATYAAAVLFRISEDKNPDY
RKRVSVELTNSLFKHDPAAWEAAQSMIPINEPYGDDMDATYRPMYSSDVPLDPLEMHMDM
DGDYPIDTYSDGLRPPYPTADHMLA
Sequence length 745
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
48
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Arrhythmogenic right ventricular dysplasia 12 Likely pathogenic; Pathogenic rs2143591648, rs2143651415, rs2143683612, rs2143697976, rs2143426682, rs2143456924, rs2143416425, rs2143680611, rs2544036992, rs2544179444, rs113994177, rs2544109573, rs1555602420, rs2544160342, rs2544050841
View all (6 more)
RCV001378185
RCV001386724
RCV001382051
RCV001999850
RCV001912788
View all (16 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Cardiomyopathy Likely pathogenic rs1915470891 RCV001170359
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Naxos disease Likely pathogenic; Pathogenic rs2143591648, rs2143651415, rs2143683612, rs2143697976, rs2143426682, rs2143456924, rs2143416425, rs2143680611, rs2544036992, rs782460555, rs797046139, rs2544179444, rs113994177, rs2544109573, rs1555602420
View all (10 more)
RCV001378185
RCV001386724
RCV001382051
RCV001999850
RCV001912788
View all (20 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Primary dilated cardiomyopathy Likely pathogenic rs2544109091 RCV003233329
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ALZHEIMER DISEASE GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ANDROGENETIC ALOPECIA GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Arrhythmogenic right ventricular cardiomyopathy Uncertain significance; Conflicting classifications of pathogenicity ClinVar
ClinVar, Disgenet
★★★☆☆
Reported in Unknown/Other Associations (≥2 sources)
ARRHYTHMOGENIC RIGHT VENTRICULAR DYSPLASIA Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acanthosis Nigricans Acanthosis Nigricans HPO_DG
★☆☆☆☆
Found in Text Mining only
Acute Coronary Syndrome Coronary Syndrome BEFREE 23110151
★☆☆☆☆
Found in Text Mining only
Alopecia Alopecia HPO_DG
★☆☆☆☆
Found in Text Mining only
ANONYCHIA Anonychia HPO_DG
★☆☆☆☆
Found in Text Mining only
Arrhythmogenic Right Ventricular Dysplasia Arrhythmogenic right ventricular cardiomyopathy LHGDN 11984022, 17924338
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Arrhythmogenic Right Ventricular Dysplasia Arrhythmogenic right ventricular cardiomyopathy Pubtator 20124997, 20130592, 25445213, 25837155, 31275992, 33303784, 33831308, 37418234, 37995437, 39180012 Associate
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Arrhythmogenic Right Ventricular Dysplasia Arrhythmogenic right ventricular cardiomyopathy BEFREE 20130592, 21245375, 22214898, 23871674, 25087486, 29802319, 31386562
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Arrhythmogenic Right Ventricular Dysplasia Arrhythmogenic right ventricular cardiomyopathy CLINVAR_DG
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Arrhythmogenic Right Ventricular Dysplasia, Familial, 12 Arrhythmogenic right ventricular cardiomyopathy UNIPROT_DG 17924338, 20031617
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Arrhythmogenic Right Ventricular Dysplasia, Familial, 12 Arrhythmogenic right ventricular cardiomyopathy GENOMICS_ENGLAND_DG 23500315, 27532257
★★☆☆☆
Found in Text Mining + Unknown/Other Associations