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Gene Gene information from NCBI Gene database.
Entrez ID 5154
Gene name Platelet derived growth factor subunit A
Gene symbol PDGFA
Synonyms (NCBI Gene)
PDGF-APDGF1
Chromosome 7
Chromosome location 7p22.3
Summary This gene encodes a member of the protein family comprised of both platelet-derived growth factors (PDGF) and vascular endothelial growth factors (VEGF). The encoded preproprotein is proteolytically processed to generate platelet-derived growth factor sub
miRNA miRNA information provided by mirtarbase database.
197 Show/Hide all (197)
miRTarBase ID miRNA Experiments Reference
MIRT005549 hsa-let-7d-5p ELISAImmunoblotMicroarrayqRT-PCR 21266476
MIRT053724 hsa-miR-221-3p Microarray 22942087
MIRT438915 hsa-miR-29b-3p Luciferase reporter assayqRT-PCR 23354167
MIRT438915 hsa-miR-29b-3p Luciferase reporter assayqRT-PCR 23354167
MIRT622855 hsa-miR-7110-3p HITS-CLIP 23824327
Transcription factors Transcription factors information provided by TRRUST V2 database.
5
Transcription factor Regulation Reference
FOXF2 Repression 19562724
FOXO1 Unknown 19244250
HOXB7 Activation 21183939
WT1 Repression 1429549;7535092
WT1 Unknown 8415628
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
82 Show/Hide all (82)
GO ID Ontology Definition Evidence Reference
GO:0000139 Component Golgi membrane TAS
GO:0001525 Process Angiogenesis IBA
GO:0001525 Process Angiogenesis IEA
GO:0001525 Process Angiogenesis ISS
GO:0001775 Process Cell activation TAS 10508235
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
173430 8799 ENSG00000197461
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P04085
Protein name Platelet-derived growth factor subunit A (PDGF subunit A) (PDGF-1) (Platelet-derived growth factor A chain) (Platelet-derived growth factor alpha polypeptide)
Protein function Growth factor that plays an essential role in the regulation of embryonic development, cell proliferation, cell migration, survival and chemotaxis. Potent mitogen for cells of mesenchymal origin. Required for normal lung alveolar septum formatio
PDB 3MJK
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00341 PDGF 96 → 179 PDGF/VEGF domain Domain
PF04692 PDGF_N 21 → 95 Platelet-derived growth factor, N terminal region Family
Sequence
Sequence length 211
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
KEGG Pathway Reactome Pathway
EGFR tyrosine kinase inhibitor resistance Platelet degranulation
MAPK signaling pathway PIP3 activates AKT signaling
Ras signaling pathway Downstream signal transduction
Rap1 signaling pathway Signaling by PDGF
Calcium signaling pathway Constitutive Signaling by Aberrant PI3K in Cancer
Phospholipase D signaling pathway Non-integrin membrane-ECM interactions
PI3K-Akt signaling pathway RAF/MAP kinase cascade
Focal adhesion PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling
Gap junction  
JAK-STAT signaling pathway  
Regulation of actin cytoskeleton  
Pathways in cancer  
Transcriptional misregulation in cancer  
MicroRNAs in cancer  
Glioma  
Prostate cancer  
Melanoma  
Choline metabolism in cancer  
Fluid shear stress and atherosclerosis  
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
17
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Show/Hide Unknown Diseases (17)
Phenotype Name Clinical Significance Source Reference Evidence Score
AMYOTROPHIC LATERAL SCLEROSIS 1 — CTD, Disgenet
CTD, Disgenet
11796754
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ANDROGENETIC ALOPECIA — GWAS catalog 28196072, 30573740
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BONE DISEASES, ENDOCRINE — CTD, Disgenet
CTD, Disgenet
18635661
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BREAST NEOPLASMS — CTD 16298037
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CARCINOMA — CTD 12376462, 16316942
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Show/Hide Text Mining Associations (171)
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Adenocarcinoma Adenocarcinoma LHGDN 18084257
★★★★★
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma Adenocarcinoma BEFREE 18592007, 7665222
★★★★★
★☆☆☆☆
Found in Text Mining only
Adenomatous Polyposis Coli Multiple polyposis syndrome BEFREE 17785554
★★★★★
★☆☆☆☆
Found in Text Mining only
Alopecia Alopecia GWASCAT_DG 28196072
★★★★★
★☆☆☆☆
Found in Text Mining only
Alveolitis, Fibrosing Alveolitis CTD_human_DG 16324872
★★★★★
★☆☆☆☆
Found in Text Mining only
Ameloblastoma Ameloblastoma LHGDN 18284546
★★★★★
★☆☆☆☆
Found in Text Mining only
AMYOTROPHIC LATERAL SCLEROSIS 1 Lateral Sclerosis CTD_human_DG 11796754
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Amyotrophic Lateral Sclerosis, Familial Amyotrophic lateral sclerosis CTD_human_DG 11796754
★★★★★
★☆☆☆☆
Found in Text Mining only
Amyotrophic Lateral Sclerosis, Sporadic Lateral Sclerosis CTD_human_DG 11796754
★★★★★
★☆☆☆☆
Found in Text Mining only
Anaplastic carcinoma Anaplastic Carcinoma CTD_human_DG 12376462, 16316942
★★★★★
★☆☆☆☆
Found in Text Mining only