Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Situs ambiguus Situs inversus
7 genes
Show details
3 of 7 corroborated by 2+ sources
PKD1L1(1), DNAH5(1), CIROP(1), DNAH9(2), MMP21(2), CFAP53(1), NODAL(2)
0.200 0.350 2.19e-16 3.44e-15 ✓ sig. Cluster 46 →
Brugada syndrome Hereditary atrial fibrillation
9 genes
Show details
9 of 9 corroborated by 2+ sources
GATA4(2), ABCC9(4), KCNJ2(2), KCNQ1(2), SCN5A(8), TTN(2), SCN1B(6), SCN2B(4), SCN3B(7)
0.114 0.375 2.21e-16 3.46e-15 ✓ sig. Cluster 4 →
Dementia Oligodendroglioma
66 genes
Show details
ANK3(1), BIN1(1), CAMK1D(1), CCDC190(1), CHN2(1), CHRM3(1), CNTNAP2(1), CPNE4(1), DGKB(1), EGFLAM(1), FAM135B(1), FAR2(1) +54 more
0.061 0.118 2.22e-16 3.48e-15 ✓ sig. Cluster 2 →
Genetic steroid-resistant nephrotic syndrome Steroid-resistant nephrotic syndrome
7 genes
Show details
WT1(1), COL4A3(1), PAX2(1), CRB2(1), NPHS2(1), AVIL(1), NPHS1(1)
0.171 0.538 2.25e-16 3.52e-15 ✓ sig. —
Brain ischemia Sepsis
10 genes
Show details
10 of 10 corroborated by 2+ sources
CASP3(2), IL1B(2), TNF(2), IL6(2), MAPK1(2), CSF3(2), MMP9(2), ANGPT1(2), MAPK3(2), NOS2(2)
0.105 0.294 2.32e-16 3.63e-15 ✓ sig. Cluster 114 →
Congestive heart failure Pulmonary hypertension
15 genes
Show details
14 of 15 corroborated by 2+ sources
EDNRB(2), ACE(2), NOS3(2), SOD2(2), TNF(2), SLC6A4(2), HIF1A(2), NPPB(2), CCL2(2), RYR1(1), ACE2(2), EDN1(2) +3 more
0.066 0.246 2.34e-16 3.66e-15 ✓ sig. —
Migraine Stroke
40 genes
Show details
11 of 40 corroborated by 2+ sources
CASZ1(2), PRDM16(3), RUNX1(1), AGBL1(1), BAZ1B(1), CDC5L(1), DENND1A(1), MLXIPL(1), PRKG1(1), SUPT3H(1), TCF7L2(1), WDR12(1) +28 more
0.058 0.124 2.39e-16 3.74e-15 ✓ sig. —
Congenital pes cavus Dejerine-sottas disease
7 genes
Show details
1 of 7 corroborated by 2+ sources
DYNC1H1(1), NEFL(1), SH3TC2(1), GARS1(1), MPZ(3), GDAP1(1), GJB1(1)
0.159 0.583 2.44e-16 3.80e-15 ✓ sig. Cluster 15 →
Congenital pes cavus Hypertrophic neuropathy
7 genes
Show details
1 of 7 corroborated by 2+ sources
DYNC1H1(1), NEFL(1), SH3TC2(1), GARS1(1), MPZ(2), GDAP1(1), GJB1(1)
0.159 0.583 2.44e-16 3.80e-15 ✓ sig. Cluster 15 →
Congenital pes cavus Roussy-levy syndrome
7 genes
Show details
1 of 7 corroborated by 2+ sources
DYNC1H1(1), NEFL(1), SH3TC2(1), GARS1(1), MPZ(4), GDAP1(1), GJB1(1)
0.159 0.583 2.44e-16 3.80e-15 ✓ sig. Cluster 15 →
46,xy gonadal dysgenesis Ovarian dysgenesis
6 genes
Show details
6 of 6 corroborated by 2+ sources
BMP15(5), FSHR(5), MRPS22(4), NUP107(4), PSMC3IP(5), SPIDR(5)
0.273 0.500 2.49e-16 3.88e-15 ✓ sig. Cluster 38 →
Maturity-onset diabetes of the young Permanent neonatal diabetes mellitus
6 genes
Show details
6 of 6 corroborated by 2+ sources
INS(5), ABCC8(5), KCNJ11(5), GCK(6), PDX1(4), NEUROD1(3)
0.273 0.462 2.78e-16 4.32e-15 ✓ sig. Cluster 36 →
Congenital myopathy Myopathy
12 genes
Show details
10 of 12 corroborated by 2+ sources
SCN4A(4), ACTA1(7), MEGF10(3), RYR1(6), MYH7(5), TTN(3), DYSF(3), TPM3(4), ITGA7(1), FKRP(1), MYH2(2), COL6A6(2)
0.082 0.267 2.82e-16 4.39e-15 ✓ sig. —
Congenital hyperinsulinism Hyperinsulinism
6 genes
Show details
6 of 6 corroborated by 2+ sources
HADH(3), ABCC8(6), HNF4A(4), KCNJ11(4), GCK(4), GLUD1(2)
0.140 1.000 2.84e-16 4.41e-15 ✓ sig. Cluster 36 →
Charcot-marie-tooth disease Hereditary spastic paraplegia
16 genes
Show details
8 of 16 corroborated by 2+ sources
SETX(2), SPG11(6), NRG1(1), BICD2(1), KIF5A(4), SH3TC2(6), BSCL2(1), POLG(1), REEP1(1), PLEKHG5(5), DNM2(7), TFG(2) +4 more
0.073 0.158 2.90e-16 4.50e-15 ✓ sig. —
Genetic predisposition to disease Urinary bladder neoplasms
13 genes
Show details
CYP17A1(1), CAT(1), TERT(1), ESR1(1), PON1(1), GSTM1(1), SOD1(1), GPX1(1), JAK2(1), ERCC4(1), PPP3CC(1), BAP1(1) +1 more
0.073 0.271 2.92e-16 4.53e-15 ✓ sig. —
Congenital pes cavus Peroneal muscle atrophy
7 genes
Show details
DYNC1H1(1), NEFL(1), SH3TC2(1), GARS1(1), MPZ(1), GDAP1(1), GJB1(1)
0.156 0.583 2.97e-16 4.60e-15 ✓ sig. Cluster 15 →
Periodic limb movement disorder Willis-ekbom disease
9 genes
Show details
3 of 9 corroborated by 2+ sources
BTBD9(3), CNTNAP5(1), MAP2K5(1), PTPRD(3), MYT1(1), MEIS1(3), CCDC148(1), STK33(1), LMO1(1)
0.046 0.818 3.10e-16 4.80e-15 ✓ sig. —
Hereditary motor and sensory neuropathies Spinal muscular atrophy
10 genes
Show details
6 of 10 corroborated by 2+ sources
KIF1B(1), TRPV4(3), DYNC1H1(4), ATP7A(2), HSPB1(1), PLEKHG5(2), GARS1(4), HSPB8(1), IGHMBP2(3), HSPB3(1)
0.106 0.270 3.26e-16 5.05e-15 ✓ sig. Cluster 15 →
Hypercalcemia Osteoporosis
9 genes
Show details
9 of 9 corroborated by 2+ sources
TNF(2), CALCR(3), IL6(2), PTH(2), KL(2), TNFRSF11B(3), CYP24A1(2), CALCA(2), TNFSF11(3)
0.060 0.692 3.34e-16 5.17e-15 ✓ sig. —
Dyskeratosis congenita Telomere-related pulmonary fibrosis and/or bone marrow failure
6 genes
Show details
6 of 6 corroborated by 2+ sources
RTEL1(8), TERT(8), PARN(7), ZCCHC8(5), POT1(4), NOP10(6)
0.207 0.750 3.48e-16 5.37e-15 ✓ sig. Cluster 64 →
Cerebral amyloid angiopathy Lewy body disease
13 genes
Show details
1 of 13 corroborated by 2+ sources
APOC1(1), APOE(3), CDKAL1(1), KAZN(1), PTPRD(1), SGK1(1), HS3ST4(1), ATP10A(1), POLD3(1), ABTB2(1), KCNB2(1), RAG1(1) +1 more
0.084 0.183 3.48e-16 5.37e-15 ✓ sig. —
Cobalamin c disease Intracellular cobalamin metabolism disorder
5 genes
Show details
5 of 5 corroborated by 2+ sources
MMACHC(6), MMADHC(2), ABCD4(2), HCFC1(2), LMBRD1(2)
0.417 0.714 3.67e-16 5.66e-15 ✓ sig. Cluster 246 →
Nasal disorder Nasal polyp
8 genes
Show details
CLEC16A(1), IL18R1(1), IL7R(1), IL1RL1(1), RANBP6(1), SPEF2(1), WDR36(1), CYP2S1(1)
0.145 0.348 3.75e-16 5.79e-15 ✓ sig. Cluster 137 →
Autoimmune hepatitis Rhinitis
10 genes
Show details
9 of 10 corroborated by 2+ sources
HLA-DQA1(2), CYP2D6(1), IL10(2), IL2(2), IL4(2), LEP(2), HLA-DQB1(2), IFNG(2), IL13(2), IL18(2)
0.106 0.263 3.75e-16 5.79e-15 ✓ sig. Cluster 16 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.