Gene Gene information from NCBI Gene database.
Entrez ID 2746
Gene name Glutamate dehydrogenase 1
Gene symbol GLUD1
Synonyms (NCBI Gene)
GDHGDH1GLUDhGDH1
Chromosome 10
Chromosome location 10q23.2
Summary This gene encodes glutamate dehydrogenase, which is a mitochondrial matrix enzyme that catalyzes the oxidative deamination of glutamate to alpha-ketoglutarate and ammonia. This enzyme has an important role in regulating amino acid-induced insulin secretio
SNPs SNP information provided by dbSNP.
11
SNP ID Visualize variation Clinical significance Consequence
rs56275071 G>A Pathogenic Missense variant, coding sequence variant
rs121909730 G>A Pathogenic Missense variant, coding sequence variant
rs121909731 G>A,C Pathogenic Missense variant, coding sequence variant
rs121909732 A>G Pathogenic Missense variant, coding sequence variant
rs121909733 C>T Pathogenic Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
340
miRTarBase ID miRNA Experiments Reference
MIRT048701 hsa-miR-99a-5p CLASH 23622248
MIRT045359 hsa-miR-185-5p CLASH 23622248
MIRT041407 hsa-miR-193b-3p CLASH 23622248
MIRT038802 hsa-miR-93-3p CLASH 23622248
MIRT724259 hsa-miR-7151-5p HITS-CLIP 19536157
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
37
GO ID Ontology Definition Evidence Reference
GO:0000166 Function Nucleotide binding IEA
GO:0004352 Function Glutamate dehydrogenase (NAD+) activity IBA
GO:0004352 Function Glutamate dehydrogenase (NAD+) activity IDA 11903050, 15578726
GO:0004352 Function Glutamate dehydrogenase (NAD+) activity IEA
GO:0004353 Function Glutamate dehydrogenase [NAD(P)+] activity IDA 11032875
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
138130 4335 ENSG00000148672
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P00367
Protein name Glutamate dehydrogenase 1, mitochondrial (GDH 1) (EC 1.4.1.3)
Protein function Mitochondrial glutamate dehydrogenase that catalyzes the conversion of L-glutamate into alpha-ketoglutarate. Plays a key role in glutamine anaplerosis by producing alpha-ketoglutarate, an important intermediate in the tricarboxylic acid cycle (P
PDB 1L1F , 1NR1 , 6DQG , 7UZM , 8KGY , 8SK8 , 8W4J
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF02812 ELFV_dehydrog_N 112 242 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain Domain
PF00208 ELFV_dehydrog 263 467 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Domain
Sequence
Sequence length 558
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
17
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Familial hyperinsulinemia Likely pathogenic; Pathogenic rs121909730 RCV000760160
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Familial hyperinsulinism Likely pathogenic; Pathogenic rs2539820425 RCV004700764
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
GLUD1-related disorder Likely pathogenic rs1424693533 RCV003406251
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Hyperinsulinism-hyperammonemia syndrome Pathogenic; Likely pathogenic rs2133777379, rs121909734, rs2539820425, rs121909730, rs121909731, rs121909735, rs56275071, rs121909737 RCV001385122
RCV002249060
RCV002465092
RCV000211493
RCV000017501
View all (5 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
Acute myeloid leukemia Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Cervical cancer Benign; Likely benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CONGENITAL HYPERINSULINISM Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
GOUT GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations