Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Chronic obstructive pulmonary disease Obstructive airway disease
39 genes
Show details
38 of 39 corroborated by 2+ sources
SERPINA1(2), CYP1A2(2), TRPV4(2), NOS3(2), HMOX1(2), ICAM1(2), TLR4(1), TNF(2), IL6(2), EPHX1(2), DSP(2), HIF1A(2) +27 more
0.382 0.951 3.73e-87 1.39e-85 ✓ sig. Cluster 174 →
Asthma Obstructive pulmonary disease
125 genes
Show details
19 of 125 corroborated by 2+ sources
RERE(1), CDH2(1), AFF3(1), APOE(1), ARHGEF28(1), BNC2(1), C6orf118(1), CCDC91(1), COL6A3(1), CSMD1(1), EMSY(1), ERBB3(1) +113 more
0.083 0.224 2.65e-33 5.58e-32 ✓ sig. Cluster 49 →
Atrial fibrillation Obstructive pulmonary disease
101 genes
Show details
23 of 101 corroborated by 2+ sources
HMGA2(1), CASZ1(3), RREB1(1), ZFPM2(1), FGFR3(1), ATP2A2(1), AMPD3(1), CACNA1D(1), AFF3(1), AKAP6(3), BCAS3(1), BNC2(1) +89 more
0.076 0.181 1.08e-26 1.96e-25 ✓ sig. —
Gastresophageal reflux disease Obstructive pulmonary disease
56 genes
Show details
DPYD(1), ATP2A2(1), CACNA1D(1), AFF3(1), AKAP6(1), APOE(1), CABP1(1), CAPZA3(1), CCDC91(1), CELF4(1), CHRM3(1), CSMD1(1) +44 more
0.072 0.201 2.38e-26 4.23e-25 ✓ sig. —
Obstructive pulmonary disease Respiratory system disease
51 genes
Show details
RERE(1), RREB1(1), EMSY(1), FADS1(1), FADS2(1), GABBR1(1), HLA-DQA1(1), ITGB8(1), RIN3(1), TBL1XR1(1), TET2(1), TSPAN14(1) +39 more
0.068 0.212 3.44e-25 5.92e-24 ✓ sig. Cluster 49 →
Inflammatory bowel disease Obstructive pulmonary disease
84 genes
Show details
6 of 84 corroborated by 2+ sources
WWOX(1), ATP2A2(1), AFF3(1), ASCC2(1), ATP8B4(1), BSN(1), DCBLD1(1), EMSY(1), ERBB3(1), FADS1(1), FADS2(1), FOXP2(1) +72 more
0.072 0.150 3.93e-23 6.35e-22 ✓ sig. —
Chronic obstructive pulmonary disease Pulmonary fibrosis
12 genes
Show details
12 of 12 corroborated by 2+ sources
SERPINA1(2), HMOX1(2), TNF(2), IL6(2), DSP(3), ELN(2), TGFB1(2), MMP9(2), CXCL8(2), CXCL2(2), FAM13A(2), SOD3(2)
0.088 0.293 4.19e-17 5.53e-16 ✓ sig. Cluster 174 →
Androgenetic alopecia Obstructive pulmonary disease
53 genes
Show details
KANSL1(1), CASZ1(1), RERE(1), RREB1(1), HDAC4(1), FGFR3(1), AFF3(1), CCDC91(1), FADS2(1), GLIS3(1), HDAC9(1), L3MBTL3(1) +41 more
0.058 0.130 3.87e-16 4.90e-15 ✓ sig. —
Irritable bowel syndrome Obstructive pulmonary disease
30 genes
Show details
RERE(1), RREB1(1), ASCC2(1), CADM2(1), CELF4(1), EMSY(1), FOXP2(1), GLIS3(1), HEYL(1), HLA-C(1), MECOM(1), MPHOSPH9(1) +18 more
0.045 0.224 5.38e-16 6.77e-15 ✓ sig. —
Obstructive pulmonary disease Open angle glaucoma
49 genes
Show details
5 of 49 corroborated by 2+ sources
HMGA2(1), RERE(1), ZFPM2(1), ANTXR1(1), APOE(2), BCAS3(1), BNC2(1), CADM2(1), CCDC91(1), COL6A3(2), DGKB(1), GLIS3(1) +37 more
0.056 0.132 2.48e-15 3.03e-14 ✓ sig. —
Chronic obstructive pulmonary disease Sepsis
8 genes
Show details
8 of 8 corroborated by 2+ sources
NOS3(2), TLR4(2), TNF(2), IL6(2), TGFB1(2), MMP9(2), NOS2(2), MIF(2)
0.118 0.235 2.01e-14 2.37e-13 ✓ sig. —
Chronic obstructive pulmonary disease Cystic fibrosis
9 genes
Show details
8 of 9 corroborated by 2+ sources
SERPINA1(3), NOS3(2), AGER(1), HMOX1(4), TNF(2), EPHX1(2), TGFB1(5), CYP1A1(2), MIF(3)
0.095 0.220 4.57e-14 5.26e-13 ✓ sig. Cluster 174 →
Diverticular disease Obstructive pulmonary disease
34 genes
Show details
2 of 34 corroborated by 2+ sources
RREB1(1), ARHGEF28(1), ICA1L(1), MAML3(1), MAPKAP1(1), MMS22L(1), SCARA5(1), SLC35F3(2), TBX5(1), TRPS1(1), VAPA(1), EFEMP1(1) +22 more
0.044 0.137 2.02e-11 1.99e-10 ✓ sig. —
Dental caries Obstructive pulmonary disease
31 genes
Show details
1 of 31 corroborated by 2+ sources
ASCC2(1), GLIS3(1), HLA-DQA1(1), HLA-DRB5(1), IP6K1(1), MTMR3(1), OR5V1(1), PDZD2(1), RARB(1), RBMS3(1), TCF7L2(1), THSD4(1) +19 more
0.041 0.134 2.73e-10 2.47e-9 ✓ sig. Cluster 49 →
Chronic obstructive pulmonary disease Oral submucous fibrosis
5 genes
Show details
4 of 5 corroborated by 2+ sources
TNF(2), IL6(2), TGFB1(2), MMP9(2), CXCL8(1)
0.088 0.250 1.52e-9 1.30e-8 ✓ sig. —
Hermansky-pudlak syndrome 4 Pulmonary disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
HPS4(2)
0.500 1.000 6.46e-5 1.98e-4 ✓ sig. —
Hermansky-pudlak syndrome Pulmonary disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
HPS4(8)
0.083 1.000 7.10e-4 1.17e-3 ✓ sig. —
Chronic obstructive pulmonary disease Susceptibility to respiratory infections associated with CD8alpha chain mutation
1 gene
Show details
1 of 1 corroborated by 2+ sources
CD8A(2)
0.024 1.000 2.65e-3 3.41e-3 ✓ sig. Cluster 174 →
Chronic obstructive pulmonary disease Rheumatoid arthritis, systemic juvenile, susceptibility to
1 gene
Show details
1 of 1 corroborated by 2+ sources
MIF(2)
0.024 1.000 2.65e-3 3.41e-3 ✓ sig. —
Chronic obstructive pulmonary disease Neurodevelopmental disorder with progressive spasticity and brain abnormalities
1 gene
Show details
1 of 1 corroborated by 2+ sources
EEFSEC(2)
0.024 1.000 2.65e-3 3.41e-3 ✓ sig. —
Generalized epilepsy Pulmonary disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
HPS4(2)
0.015 1.000 4.20e-3 5.13e-3 ✓ sig. —
Interstitial lung disease Pulmonary disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
HPS4(2)
0.014 1.000 4.39e-3 5.34e-3 ✓ sig. —
Epilepsy Pulmonary disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
HPS4(2)
0.004 1.000 1.76e-2 1.90e-2 ✓ sig. —
Obstructive pulmonary disease Poikiloderma with neutropenia
1 gene
Show details
1 of 1 corroborated by 2+ sources
USB1(2)
0.002 1.000 3.61e-2 3.78e-2 ✓ sig. —
Obstructive pulmonary disease Van den ende-gupta syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SCARF2(2)
0.002 1.000 3.61e-2 3.78e-2 ✓ sig. —

Showing 25 of 43 matching pairs, sorted by significance (ascending). Click a column header to sort.