Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Intestinal pseudo-obstruction Visceral neuropathy
2 genes
Show details
1 of 2 corroborated by 2+ sources
NDE1(1), ACTG2(2)
0.222 0.500 7.59e-7 4.54e-6 ✓ sig. Cluster 220 →
Cold paroxysmal hemoglobinuria Esophageal achalasia
2 genes
Show details
2 of 2 corroborated by 2+ sources
0.222 0.500 7.59e-7 4.54e-6 ✓ sig. Cluster 1 →
Autoimmune polyendocrine syndrome Diabetic nephropathy type 1
2 genes
Show details
2 of 2 corroborated by 2+ sources
0.222 0.500 7.59e-7 4.54e-6 ✓ sig. Cluster 1 →
Diabetic nephropathy type 1 Esophageal achalasia
2 genes
Show details
2 of 2 corroborated by 2+ sources
0.222 0.500 7.59e-7 4.54e-6 ✓ sig. Cluster 1 →
Diabetic nephropathy type 1 Oropharyngeal neoplasms
2 genes
Show details
2 of 2 corroborated by 2+ sources
0.222 0.500 7.59e-7 4.54e-6 ✓ sig. Cluster 1 →
Autoimmune polyendocrine syndrome Hemoglobinuria paroxysmal
2 genes
Show details
0.222 0.500 7.59e-7 4.54e-6 ✓ sig. Cluster 1 →
Cerebellar hypoplasia/atrophy, epilepsy, and global developmental delay Pontocerebellar hypoplasia
4 genes
Show details
4 of 4 corroborated by 2+ sources
ATAD3A(4), TSEN54(7), SEPSECS(5), RARS2(6)
0.063 0.129 7.57e-7 4.54e-6 ✓ sig. —
Apoceruloplasmin deficiency Hemochromatosis
2 genes
Show details
2 of 2 corroborated by 2+ sources
CP(2), SLC40A1(5)
0.133 1.000 7.68e-7 4.57e-6 ✓ sig. —
Aniridia-cerebellar ataxia-intellectual disability syndrome Anterior segment mesenchymal dysgenesis
2 genes
Show details
2 of 2 corroborated by 2+ sources
ITPR1(4), PAX6(3)
0.133 1.000 7.68e-7 4.57e-6 ✓ sig. —
Cleft palate and bilateral cleft lip Congenital cardiomyopathy
2 genes
Show details
ND5(1), ND4(1)
0.133 1.000 7.68e-7 4.57e-6 ✓ sig. Cluster 32 →
autosomal recessive limb-girdle muscular dystrophy Sarcoglycanopathies
2 genes
Show details
2 of 2 corroborated by 2+ sources
SGCA(3), SGCG(2)
0.133 1.000 7.68e-7 4.57e-6 ✓ sig. Cluster 14 →
Coronary restenosis Mitral valve disease
2 genes
Show details
2 of 2 corroborated by 2+ sources
ACE(2), MTHFR(2)
0.133 1.000 7.68e-7 4.57e-6 ✓ sig. Cluster 195 →
Coronary restenosis Rheumatic disease of mitral valve
2 genes
Show details
2 of 2 corroborated by 2+ sources
ACE(2), MTHFR(2)
0.133 1.000 7.68e-7 4.57e-6 ✓ sig. Cluster 195 →
Coronary restenosis Rheumatic mitral regurgitation
2 genes
Show details
2 of 2 corroborated by 2+ sources
ACE(2), MTHFR(2)
0.133 1.000 7.68e-7 4.57e-6 ✓ sig. Cluster 195 →
Cleft palate and bilateral cleft lip Deafness, sensorineural, autosomal-mitochondrial type
2 genes
Show details
1 of 2 corroborated by 2+ sources
ND1(1), COX1(2)
0.133 1.000 7.68e-7 4.57e-6 ✓ sig. —
Distal myopathy Welander distal myopathy
2 genes
Show details
2 of 2 corroborated by 2+ sources
SQSTM1(3), TIA1(6)
0.133 1.000 7.68e-7 4.57e-6 ✓ sig. —
Neurodegeneration with brain iron accumulation Vitreoretinochoroidopathy
2 genes
Show details
2 of 2 corroborated by 2+ sources
BEST1(5), FTH1(5)
0.133 1.000 7.68e-7 4.57e-6 ✓ sig. —
Cartilage disease Otospondylomegaepiphyseal dysplasia
2 genes
Show details
2 of 2 corroborated by 2+ sources
COL2A1(3), COL11A2(4)
0.133 1.000 7.68e-7 4.57e-6 ✓ sig. —
Lymphoproliferative syndrome X-linked lymphoproliferative syndrome
2 genes
Show details
2 of 2 corroborated by 2+ sources
XIAP(7), SH2D1A(7)
0.133 1.000 7.68e-7 4.57e-6 ✓ sig. —
Lymphocytic b-cell leukemia Sarcoma
4 genes
Show details
2 of 4 corroborated by 2+ sources
TP53(2), BCL2(1), IL6(1), ATM(2)
0.063 0.121 7.75e-7 4.61e-6 ✓ sig. —
Movement disorder Visual disorder
4 genes
Show details
4 of 4 corroborated by 2+ sources
TSEN2(2), TSEN54(2), ATXN7(2), TSEN34(2)
0.054 0.200 7.82e-7 4.66e-6 ✓ sig. —
Methylmalonic acidemia Vitamin b12 deficiency
3 genes
Show details
3 of 3 corroborated by 2+ sources
CD320(7), MMAA(8), MMUT(8)
0.083 0.273 7.86e-7 4.68e-6 ✓ sig. —
Angle closure glaucoma Graft-versus-host disease
3 genes
Show details
1 of 3 corroborated by 2+ sources
MTHFR(2), GSTM1(1), HGF(1)
0.091 0.214 7.88e-7 4.69e-6 ✓ sig. —
Kawasaki disease Lupus nephritis
5 genes
Show details
1 of 5 corroborated by 2+ sources
MBL2(1), CD40LG(1), HLA-DQB1(1), FCGR2A(3), CRP(1)
0.049 0.119 7.99e-7 4.75e-6 ✓ sig. —
Osteonecrosis of the femoral head Venous thrombosis
4 genes
Show details
4 of 4 corroborated by 2+ sources
F2(2), PLAT(2), F5(2), TFPI(2)
0.056 0.182 8.09e-7 4.81e-6 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.