Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Very long chain acyl-coa dehydrogenase deficiency Yorifuji okuno syndrome
2 genes
Show details
1 of 2 corroborated by 2+ sources
DLG4(1), ACADVL(6)
0.286 0.500 3.04e-7 1.95e-6 ✓ sig. Cluster 60 →
Diabetes insipidus Neurogenic diabetes insipidus
2 genes
Show details
2 of 2 corroborated by 2+ sources
AVP(3), AQP2(5)
0.286 0.500 3.04e-7 1.95e-6 ✓ sig. —
Diabetes insipidus Nephrogenic diabetes insipidus
2 genes
Show details
2 of 2 corroborated by 2+ sources
AVP(4), AQP2(2)
0.286 0.500 3.04e-7 1.95e-6 ✓ sig. —
Dopa-responsive dystonia Dystonia, dopa-responsive, with or without hyperphenylalaninemia
2 genes
Show details
2 of 2 corroborated by 2+ sources
GCH1(4), SPR(6)
0.286 0.500 3.04e-7 1.95e-6 ✓ sig. Cluster 112 →
Paroxysmal dystonic choreoathetosis Paroxysmal nonkinesigenic dyskinesia
2 genes
Show details
1 of 2 corroborated by 2+ sources
PRRT2(3), KCNA1(1)
0.286 0.500 3.04e-7 1.95e-6 ✓ sig. Cluster 58 →
Idiopathic infantile hypercalcemia Kidney and ureter calculus
2 genes
Show details
2 of 2 corroborated by 2+ sources
SLC34A1(6), CYP24A1(5)
0.286 0.500 3.04e-7 1.95e-6 ✓ sig. Cluster 262 →
Basal cell nevus syndrome Gorlin syndrome
2 genes
Show details
2 of 2 corroborated by 2+ sources
PTCH1(4), SUFU(4)
0.286 0.500 3.04e-7 1.95e-6 ✓ sig. —
Homocystinuria with megaloblastic anemia Neural tube defects, folate-sensitive
2 genes
Show details
2 of 2 corroborated by 2+ sources
MTRR(4), MTR(2)
0.286 0.500 3.04e-7 1.95e-6 ✓ sig. Cluster 121 →
Neurofibromatosis Neurofibromatosis-noonan syndrome
2 genes
Show details
2 of 2 corroborated by 2+ sources
NF1(7), SPRED1(2)
0.286 0.500 3.04e-7 1.95e-6 ✓ sig. Cluster 77 →
Autoimmune polyendocrine syndrome Esophageal achalasia
2 genes
Show details
2 of 2 corroborated by 2+ sources
0.286 0.500 3.04e-7 1.95e-6 ✓ sig. Cluster 1 →
Esophageal achalasia Oropharyngeal neoplasms
2 genes
Show details
2 of 2 corroborated by 2+ sources
0.286 0.500 3.04e-7 1.95e-6 ✓ sig. Cluster 1 →
Galactokinase deficiency Weber-cockayne syndrome
2 genes
Show details
1 of 2 corroborated by 2+ sources
ITGB4(1), GALK1(3)
0.286 0.500 3.04e-7 1.95e-6 ✓ sig. —
Bladder cancer Penile neoplasms
2 genes
Show details
2 of 2 corroborated by 2+ sources
KRAS(2), HRAS(2)
0.286 0.500 3.04e-7 1.95e-6 ✓ sig. Cluster 18 →
Cardiofacial dysplasia Ellis-van creveld syndrome
2 genes
Show details
2 of 2 corroborated by 2+ sources
PRKACB(5), PRKACA(5)
0.200 1.000 3.04e-7 1.95e-6 ✓ sig. —
Curry-hall syndrome Ellis-van creveld syndrome
2 genes
Show details
2 of 2 corroborated by 2+ sources
EVC(7), EVC2(7)
0.200 1.000 3.04e-7 1.95e-6 ✓ sig. Cluster 289 →
Aniridia Congenital aniridia
2 genes
Show details
2 of 2 corroborated by 2+ sources
WT1(4), PAX6(4)
0.200 1.000 3.04e-7 1.95e-6 ✓ sig. Cluster 35 →
Aniridia Axenfeld anomaly
2 genes
Show details
2 of 2 corroborated by 2+ sources
FOXC1(2), PITX2(2)
0.200 1.000 3.04e-7 1.95e-6 ✓ sig. —
Transcobalamin deficiency Vitamin deficiency disorder
2 genes
Show details
2 of 2 corroborated by 2+ sources
TCN2(7), TCN1(2)
0.200 1.000 3.04e-7 1.95e-6 ✓ sig. Cluster 106 →
Congenital arteriovenous malformation Venous malformation
2 genes
Show details
1 of 2 corroborated by 2+ sources
TEK(3), PIK3CA(1)
0.200 1.000 3.04e-7 1.95e-6 ✓ sig. —
Glucocorticoid deficiency Primary adrenal insufficiency
2 genes
Show details
CUX1(1), MYL10(1)
0.200 1.000 3.04e-7 1.95e-6 ✓ sig. —
Intracellular cobalamin metabolism disorder methylmalonic aciduria and homocystinuria
2 genes
Show details
2 of 2 corroborated by 2+ sources
ZNF143(2), THAP11(2)
0.200 1.000 3.04e-7 1.95e-6 ✓ sig. Cluster 246 →
Juvenile hyperuricemic nephropathy Tubulointerstitial kidney disease
2 genes
Show details
2 of 2 corroborated by 2+ sources
REN(5), UMOD(4)
0.200 1.000 3.04e-7 1.95e-6 ✓ sig. —
Large cell carcinoma Small cell carcinoma
2 genes
Show details
CYP2A6(1), PYCARD(1)
0.200 1.000 3.04e-7 1.95e-6 ✓ sig. —
Arterial occlusive disease Cholesterol embolism
2 genes
Show details
2 of 2 corroborated by 2+ sources
PLAU(2), PLAT(2)
0.200 1.000 3.04e-7 1.95e-6 ✓ sig. Cluster 123 →
Arterial occlusive disease Intracranial embolism and thrombosis
2 genes
Show details
2 of 2 corroborated by 2+ sources
PLAU(2), PLAT(2)
0.200 1.000 3.04e-7 1.95e-6 ✓ sig. Cluster 123 →

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.