Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Diencephalic mesencephalic junction dysplasia Marshall syndrome
2 genes
Show details
1 of 2 corroborated by 2+ sources
PCDH12(5), RNF14(1)
0.095 0.667 4.32e-6 2.27e-5 ✓ sig. —
Dyslipidemias Hypertriglyceridemia
3 genes
Show details
3 of 3 corroborated by 2+ sources
LPL(3), PPARA(2), PLTP(2)
0.068 0.167 4.31e-6 2.27e-5 ✓ sig. —
Corneal neovascularization Diabetic angiopathies
3 genes
Show details
2 of 3 corroborated by 2+ sources
SERPINF1(2), VEGFA(2), IL1RN(1)
0.068 0.167 4.31e-6 2.27e-5 ✓ sig. —
Corneal neovascularization Diabetic peripheral angiopathy
3 genes
Show details
1 of 3 corroborated by 2+ sources
SERPINF1(1), VEGFA(2), IL1RN(1)
0.068 0.167 4.31e-6 2.27e-5 ✓ sig. —
Congenital stromal corneal dystrophy Corneal dystrophy
2 genes
Show details
2 of 2 corroborated by 2+ sources
DCN(6), SPARCL1(3)
0.061 1.000 4.18e-6 2.20e-5 ✓ sig. Cluster 75 →
Corneal dystrophy Corneal endothelial dystrophy
2 genes
Show details
2 of 2 corroborated by 2+ sources
SLC4A11(6), KRT3(4)
0.061 1.000 4.18e-6 2.20e-5 ✓ sig. Cluster 75 →
Congenital aniridia Wilms tumor
2 genes
Show details
2 of 2 corroborated by 2+ sources
WT1(5), PAX6(2)
0.061 1.000 4.18e-6 2.20e-5 ✓ sig. Cluster 35 →
Osteopathia striata with cranial sclerosis Wilms tumor
2 genes
Show details
2 of 2 corroborated by 2+ sources
CTNNB1(3), AMER1(6)
0.061 1.000 4.18e-6 2.20e-5 ✓ sig. —
Aplastic anemia Ovarian agenesis
2 genes
Show details
DIPK1A(1), RPL5(1)
0.061 1.000 4.18e-6 2.20e-5 ✓ sig. —
Congenital hereditary endothelial dystrophy Corneal dystrophy
2 genes
Show details
2 of 2 corroborated by 2+ sources
OVOL2(4), SLC4A11(6)
0.061 1.000 4.18e-6 2.20e-5 ✓ sig. Cluster 75 →
Aplastic anemia Erythroid hypoplasia
2 genes
Show details
DIPK1A(1), RPL5(1)
0.061 1.000 4.18e-6 2.20e-5 ✓ sig. —
Hyperplasia Primary aldosteronism
3 genes
Show details
B3GLCT(1), RXFP2(1), NDP(1)
0.067 0.188 4.06e-6 2.14e-5 ✓ sig. Cluster 143 →
Endometrial neoplasms Polycystic ovary syndrome
11 genes
Show details
8 of 11 corroborated by 2+ sources
BCL11A(3), CACNA2D3(1), MSH6(2), CYP19A1(3), PPARG(1), AOPEP(1), AKR1C3(2), MGAT5B(3), AKR1C1(2), STAR(2), SRSF10(2)
0.032 0.083 4.06e-6 2.14e-5 ✓ sig. Cluster 67 →
Hereditary breast and ovarian cancer syndrome Sarcoma
3 genes
Show details
3 of 3 corroborated by 2+ sources
TP53(3), ATM(2), BRCA2(4)
0.065 0.200 4.01e-6 2.11e-5 ✓ sig. —
Diffuse large b-cell lymphoma Follicular lymphoma
3 genes
Show details
1 of 3 corroborated by 2+ sources
BCL2(2), NCOA5(1), EXOC6(1)
0.047 0.333 3.98e-6 2.10e-5 ✓ sig. Cluster 1 →
Senile cataract Ureteral calculi
2 genes
Show details
2 of 2 corroborated by 2+ sources
CAT(2), GSTP1(2)
0.125 0.500 3.94e-6 2.08e-5 ✓ sig. —
Congenital pain insensitivity Sensory neuropathy
2 genes
Show details
NGF(1), SCN11A(1)
0.125 0.500 3.94e-6 2.08e-5 ✓ sig. —
Extrinsic allergic alveolitis Hyperbilirubinemia
2 genes
Show details
1 of 2 corroborated by 2+ sources
SOD2(1), TNF(2)
0.125 0.500 3.94e-6 2.08e-5 ✓ sig. —
Homocystinuria with megaloblastic anemia Hyperhomocysteinemia
2 genes
Show details
2 of 2 corroborated by 2+ sources
MTRR(3), MTR(2)
0.125 0.500 3.94e-6 2.08e-5 ✓ sig. Cluster 121 →
Arteritis Occupational disease
2 genes
Show details
2 of 2 corroborated by 2+ sources
PON1(2), CYP1A1(2)
0.125 0.500 3.94e-6 2.08e-5 ✓ sig. —
adult neuronal ceroid lipofuscinosis Neuronal ceroid lipofuscinosis
2 genes
Show details
2 of 2 corroborated by 2+ sources
CTSF(8), DNAJC5(6)
0.063 1.000 3.92e-6 2.07e-5 ✓ sig. Cluster 51 →
Auditory neuropathy Brown-vialetto-van laere syndrome
2 genes
Show details
2 of 2 corroborated by 2+ sources
SLC52A3(6), SLC52A2(6)
0.063 1.000 3.92e-6 2.07e-5 ✓ sig. —
Ischemic stroke Vascular dementia
6 genes
Show details
3 of 6 corroborated by 2+ sources
APOE(2), TOMM40(2), MTHFR(1), PON2(1), TNF(1), PRKCH(2)
0.034 0.118 3.89e-6 2.05e-5 ✓ sig. —
Osteonecrosis of the femoral head Thrombophilia
4 genes
Show details
3 of 4 corroborated by 2+ sources
F2(6), PLAT(3), F5(6), TFPI(1)
0.049 0.125 3.88e-6 2.05e-5 ✓ sig. —
Non-syndromic cataract Nuclear cataract
2 genes
Show details
2 of 2 corroborated by 2+ sources
EPHA2(3), CRYBB3(3)
0.100 0.667 3.87e-6 2.04e-5 ✓ sig. Cluster 43 →

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.