Gene Gene information from NCBI Gene database.
Entrez ID 1634
Gene name Decorin
Gene symbol DCN
Synonyms (NCBI Gene)
CSCDDSPG2PG40PGIIPGS2SLRR1B
Chromosome 12
Chromosome location 12q21.33
Summary This gene encodes a member of the small leucine-rich proteoglycan family of proteins. Alternative splicing results in multiple transcript variants, at least one of which encodes a preproprotein that is proteolytically processed to generate the mature prot
SNPs SNP information provided by dbSNP.
4
SNP ID Visualize variation Clinical significance Consequence
rs80338741 A>- Pathogenic Frameshift variant, coding sequence variant, 3 prime UTR variant
rs80338742 G>- Pathogenic Frameshift variant, coding sequence variant, 3 prime UTR variant
rs397515545 C>- Pathogenic Frameshift variant, coding sequence variant, 3 prime UTR variant
rs587777258 T>- Pathogenic Coding sequence variant, frameshift variant, 3 prime UTR variant
miRNA miRNA information provided by mirtarbase database.
310
miRTarBase ID miRNA Experiments Reference
MIRT926407 hsa-miR-3647-3p CLIP-seq
MIRT926408 hsa-miR-4766-5p CLIP-seq
MIRT926409 hsa-miR-4282 CLIP-seq
MIRT926410 hsa-miR-4698 CLIP-seq
MIRT926411 hsa-miR-548c-3p CLIP-seq
Transcription factors Transcription factors information provided by TRRUST V2 database.
2
Transcription factor Regulation Reference
JUN Repression 8798756
NR1H4 Activation 18514055
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
27
GO ID Ontology Definition Evidence Reference
GO:0003723 Function RNA binding HDA 22658674
GO:0005515 Function Protein binding IPI 1747115, 11598131, 20026052, 25331875, 25789606
GO:0005539 Function Glycosaminoglycan binding IEA
GO:0005576 Component Extracellular region HDA 27068509
GO:0005576 Component Extracellular region IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
125255 2705 ENSG00000011465
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P07585
Protein name Decorin (Bone proteoglycan II) (PG-S2) (PG40)
Protein function May affect the rate of fibrils formation.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01462 LRRNT 53 80 Leucine rich repeat N-terminal domain Family
PF13855 LRR_8 81 141 Leucine rich repeat Repeat
PF13855 LRR_8 150 218 Leucine rich repeat Repeat
PF13855 LRR_8 221 281 Leucine rich repeat Repeat
Tissue specificity TISSUE SPECIFICITY: Detected in placenta (at protein level) (PubMed:32337544). Detected in cerebrospinal fluid, fibroblasts and urine (at protein level) (PubMed:25326458, PubMed:36213313, PubMed:37453717). {ECO:0000269|PubMed:25326458, ECO:0000269|PubMed:
Sequence
Sequence length 359
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
6
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Congenital stromal corneal dystrophy Pathogenic rs587777258, rs80338741, rs80338742, rs397515545 RCV000114315
RCV000018366
RCV000020465
RCV000055876
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
CARCINOMA, HEPATOCELLULAR CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CORNEAL DYSTROPHY, CONGENITAL STROMAL CTD, Disgenet, HPO
CTD, Disgenet, HPO
CTD, Disgenet, HPO
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
DCN-related disorder Likely benign; Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ENDOMETRIAL NEOPLASMS CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Achondrogenesis, type IB (disorder) Achondrogenesis BEFREE 11570921
★☆☆☆☆
Found in Text Mining only
Achondroplasia Achondroplasia BEFREE 1670752
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of lung (disorder) Lung adenocarcinoma BEFREE 30604627
★☆☆☆☆
Found in Text Mining only
Adenoma of large intestine Colorectal adenoma BEFREE 31524274
★☆☆☆☆
Found in Text Mining only
Alopecia Alopecia BEFREE 30320452
★☆☆☆☆
Found in Text Mining only
Amyloidosis Amyloidosis BEFREE 10652025
★☆☆☆☆
Found in Text Mining only
Anaplasia Anaplasia BEFREE 16414292
★☆☆☆☆
Found in Text Mining only
Angiofibroma Angiofibroma BEFREE 12844226
★☆☆☆☆
Found in Text Mining only
Angle Closure Glaucoma Angle Closure Glaucoma BEFREE 31725165
★☆☆☆☆
Found in Text Mining only
Aortic Aneurysm, Abdominal Aortic Aneurysm BEFREE 12417272, 29158532, 9536978
★☆☆☆☆
Found in Text Mining only