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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Congenital alveolar capillary dysplasia Mastocytosis
1 gene
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1 of 1 corroborated by 2+ sources
FOXF1(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
congenital heart defects, multiple types, 2 Diverticulitis
1 gene
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1 of 1 corroborated by 2+ sources
TAB2(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
Congenital ichthyosis-intellectual disability-spastic quadriplegia syndrome Stargardt disease
1 gene
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1 of 1 corroborated by 2+ sources
ELOVL4(6)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
Congenital nephrotic syndrome Idiopathic steroid-resistant nephrotic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
NPHS1(4)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. Cluster 30 →
Congenital plasminogen activator inhibitor deficiency type 1 Diabetic angiopathies
1 gene
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1 of 1 corroborated by 2+ sources
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
Congenital primary lymphedema of gordon Mastocytosis
1 gene
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1 of 1 corroborated by 2+ sources
VEGFC(3)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
Corneal degeneration Stargardt disease
1 gene
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1 of 1 corroborated by 2+ sources
RDH8(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. Cluster 7 →
Creatine transporter deficiency Internet addiction disorder
1 gene
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1 of 1 corroborated by 2+ sources
SLC6A8(4)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
Cystic kidney disease with ventriculomegaly Idiopathic steroid-resistant nephrotic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CRB2(3)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
acute myeloid leukemia Mastocytosis
1 gene
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1 of 1 corroborated by 2+ sources
CEBPA(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
Alveolar capillary dysplasia Mastocytosis
1 gene
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1 of 1 corroborated by 2+ sources
FOXF1(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
amyotrophic lateral sclerosis type 19 Internet addiction disorder
1 gene
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1 of 1 corroborated by 2+ sources
ERBB4(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
Anterior cruciate ligament injury Scleroderma
1 gene
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CNR2(1)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
Apolipoprotein a5 deficiency Hypertriglyceridemia
1 gene
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1 of 1 corroborated by 2+ sources
APOA5(5)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. Cluster 254 →
Diverticulitis Metaphyseal chondrodysplasia with retinitis pigmentosa
1 gene
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1 of 1 corroborated by 2+ sources
CWC27(5)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. Cluster 373 →
1p31p32 microdeletion syndrome Multinodular goiter
1 gene
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1 of 1 corroborated by 2+ sources
NFIA(3)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
multiple self-healing squamous epithelioma Scleroderma
1 gene
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1 of 1 corroborated by 2+ sources
TGFBR1(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. Cluster 25 →
Bilateral vestibulopathy Hereditary parkinson disease
1 gene
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1 of 1 corroborated by 2+ sources
RFC1(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
Brachydactyly-short stature-retinits pigmentosa syndrome Diverticulitis
1 gene
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1 of 1 corroborated by 2+ sources
CWC27(3)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. Cluster 373 →
Cardiac anomalies-short stature-joint hypermobility-facial dysmorphism syndrome due to tab2 mutation Diverticulitis
1 gene
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1 of 1 corroborated by 2+ sources
TAB2(3)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
Aromatic l-amino-acid decarboxylase deficiency Exostoses
1 gene
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1 of 1 corroborated by 2+ sources
DDC(4)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
Arthrogryposis, cleft palate, craniosynostosis, and impaired intellectual development Epithelial ovarian carcinoma
1 gene
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1 of 1 corroborated by 2+ sources
PPP3CA(4)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
atypical hemolytic-uremic syndrome with B factor anomaly Sickle cell anemia
1 gene
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1 of 1 corroborated by 2+ sources
CFB(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
autoimmune lymphoproliferative syndrome type 1 Diabetic angiopathies
1 gene
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1 of 1 corroborated by 2+ sources
FASLG(3)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. Cluster 368 →
autoimmune lymphoproliferative syndrome type 1 Diabetic peripheral angiopathy
1 gene
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1 of 1 corroborated by 2+ sources
FASLG(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. Cluster 368 →

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.