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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Beemer-langer syndrome Short-rib thoracic dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
IFT80(2)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
Boomerang dysplasia Bullous pemphigoid
1 gene
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1 of 1 corroborated by 2+ sources
FLNB(6)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
Boomerang dysplasia Congenital clubfoot
1 gene
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1 of 1 corroborated by 2+ sources
FLNB(5)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
Congenital clubfoot developmental and epileptic encephalopathy, 29
1 gene
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1 of 1 corroborated by 2+ sources
AARS1(2)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
Developmental delay with or without epilepsy Short-rib thoracic dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
SPTAN1(3)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. Cluster 22 →
Dilatation of left cardiac ventricle Restrictive cardiomyopathy
1 gene
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ACTC1(1)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
dilated cardiomyopathy 1D Restrictive cardiomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
TNNT2(4)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
dilated cardiomyopathy 1FF Restrictive cardiomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
TNNI3(4)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
dilated cardiomyopathy 1I Restrictive cardiomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
DES(2)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. Cluster 4 →
dilated cardiomyopathy 1KK Restrictive cardiomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
MYPN(4)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
dilated cardiomyopathy 1R Restrictive cardiomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
ACTC1(2)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
dilated cardiomyopathy 2A Restrictive cardiomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
TNNI3(4)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
Congenital clubfoot ehlers-danlos syndrome, musculocontractural type 1
1 gene
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1 of 1 corroborated by 2+ sources
CHST14(2)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. Cluster 24 →
MYPN-related myopathy Restrictive cardiomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
MYPN(4)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
Congenital clubfoot nail-patella syndrome
1 gene
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1 of 1 corroborated by 2+ sources
LMX1B(2)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. Cluster 24 →
nephronophthisis 12 Short-rib thoracic dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
TTC21B(3)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. Cluster 22 →
Fuchs endothelial dystrophy neutral lipid storage myopathy
1 gene
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1 of 1 corroborated by 2+ sources
PNPLA2(2)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. Cluster 75 →
Congenital impairment of spermatozoa motility Nonobstructive azoospermia
1 gene
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1 of 1 corroborated by 2+ sources
SLC26A8(2)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
ALG9-associated autosomal dominant polycystic kidney disease Polycystic liver disease
1 gene
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1 of 1 corroborated by 2+ sources
ALG9(2)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. Cluster 23 →
amyotrophic lateral sclerosis, susceptibility to, 24 Short-rib thoracic dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
NEK1(5)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. Cluster 22 →
Anterior segment dysgenesis anterior segment dysgenesis 7
1 gene
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1 of 1 corroborated by 2+ sources
PXDN(4)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
Anterior segment dysgenesis anterior segment dysgenesis 8
1 gene
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1 of 1 corroborated by 2+ sources
CPAMD8(5)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —
Anti-neutrophil antibody associated vasculitis Thiopurine immunosuppressant-induced pancreatitis
1 gene
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0.042 1.000 1.49e-3 2.31e-3 ✓ sig. Cluster 1 →
Short-rib thoracic dysplasia Thoracic malformation
1 gene
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1 of 1 corroborated by 2+ sources
FGF4(3)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. Cluster 22 →
Restrictive cardiomyopathy Timothy syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CACNA1C(6)
0.042 1.000 1.49e-3 2.31e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.