Gene Gene information from NCBI Gene database.
Entrez ID 70
Gene name Actin alpha cardiac muscle 1
Gene symbol ACTC1
Synonyms (NCBI Gene)
ACTCASD5CMD1RCMH11LVNC4
Chromosome 15
Chromosome location 15q14
Summary Actins are highly conserved proteins that are involved in various types of cell motility. Polymerization of globular actin (G-actin) leads to a structural filament (F-actin) in the form of a two-stranded helix. Each actin can bind to four others. The prot
miRNA miRNA information provided by mirtarbase database.
53
miRTarBase ID miRNA Experiments Reference
MIRT023839 hsa-miR-1-3p Proteomics 18668040
MIRT731629 hsa-miR-139-5p Luciferase reporter assay 27139165
MIRT731629 hsa-miR-139-5p Luciferase reporter assay 27139165
MIRT763851 hsa-miR-1303 CLIP-seq
MIRT763852 hsa-miR-137 CLIP-seq
Transcription factors Transcription factors information provided by TRRUST V2 database.
1
Transcription factor Regulation Reference
YY1 Repression 9171244
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
51
GO ID Ontology Definition Evidence Reference
GO:0000146 Function Microfilament motor activity IDA 16611632, 17765196
GO:0000166 Function Nucleotide binding IEA
GO:0005515 Function Protein binding IPI 30021884, 33961781
GO:0005524 Function ATP binding IDA 16611632
GO:0005524 Function ATP binding IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
102540 143 ENSG00000159251
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P68032
Protein name Actin, alpha cardiac muscle 1 (EC 3.6.4.-) (Alpha-cardiac actin) [Cleaved into: Actin, alpha cardiac muscle 1, intermediate form]
Protein function Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells.
PDB 8GSU , 8GSW , 8GT1 , 8GT2 , 8GT3 , 8GT4 , 8GT5 , 8ZB7 , 8ZI9 , 8ZJ1 , 9B3Q , 9B3R
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00022 Actin 4 377 Actin Family
Sequence
Sequence length 377
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
40
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
Arthrogryposis Likely pathogenic rs2504175858 RCV003984877
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Atrial septal defect 5 Likely pathogenic; Pathogenic rs2140432240, rs727504308, rs2504180886, rs2504177349, rs121912675, rs121912677, rs267606629, rs193922680, rs397517073, rs1566967399 RCV001961500
RCV001857531
RCV002846466
RCV003807506
RCV001380614
View all (5 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Cardiomyopathy Pathogenic; Likely pathogenic rs193922680, rs1566967399 RCV000769471
RCV000770514
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Cardiovascular phenotype Likely pathogenic; Pathogenic rs727504308, rs193922680, rs1566967399 RCV005791821
RCV002433462
RCV002386332
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ACTC1-related disorder Likely benign; Uncertain significance; Conflicting classifications of pathogenicity; Benign ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ARRHYTHMOGENIC RIGHT VENTRICULAR DYSPLASIA Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ARTHROGRYPOSIS SYNDROME GWAS catalog
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Atrial septal defect Uncertain significance; Conflicting classifications of pathogenicity ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Ametropia Ametropia CTD_human_DG 20835239
★☆☆☆☆
Found in Text Mining only
Arrhythmogenic Right Ventricular Dysplasia Arrhythmogenic right ventricular cardiomyopathy Pubtator 33947203 Associate
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
ATRIAL SEPTAL DEFECT 1 Atrial Septal Defect BEFREE 24461919
★☆☆☆☆
Found in Text Mining only
Atrial Septal Defect 5 Atrial Septal Defect CLINVAR_DG 10966831, 16611632, 17611253, 19799913, 21622575, 22590617, 23283745, 24736382, 9563954
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Atrial Septal Defect 5 Atrial Septal Defect UNIPROT_DG 17947298
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Atrial Septal Defect 5 Atrial Septal Defect GENOMICS_ENGLAND_DG 17947298, 24461919, 26061005, 27532257, 30681346
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Atrial Septal Defect 5 Atrial Septal Defect CTD_human_DG
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Atrial septal defect, ostium secundum type Atrial Septal Defect Orphanet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Atrial Septal Defects Atrial Septal Defect BEFREE 17947298, 18400036, 20962418, 23299027, 24461919, 25861618, 27139165, 31430208, 31434612
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Atrial Septal Defects Atrial Septal Defect LHGDN 17947298
★★☆☆☆
Found in Text Mining + Unknown/Other Associations