Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Aortic arch syndrome Heerfordt syndrome
1 gene
Show details
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 1 →
Arboleda-tham syndrome Vein of galen aneurysm
1 gene
Show details
1 of 1 corroborated by 2+ sources
KAT6A(3)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. —
Arginine-glycine amidinotransferase deficiency Fanconi syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
GATM(5)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 99 →
ARHGAP29-related non-syndromic orofacial cleft Cleft lip with or without cleft palate
1 gene
Show details
1 of 1 corroborated by 2+ sources
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 312 →
Ataxia with intention tremor and hypotonia Cerebellar dysfunction with variable cognitive and behavioral abnormalities
1 gene
Show details
1 of 1 corroborated by 2+ sources
POU4F1(3)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 204 →
Ateleiotic dwarfism Pituitary neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
GH1(2)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 82 →
ATM-related cancer predisposition Cardiac valvular dysplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
ATM(2)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. —
Atypical fanconi syndrome Congenital hyperinsulinism
1 gene
Show details
1 of 1 corroborated by 2+ sources
HNF4A(2)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. —
atypical hemolytic-uremic syndrome with C3 anomaly Cold paroxysmal hemoglobinuria
1 gene
Show details
1 of 1 corroborated by 2+ sources
C3(2)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 1 →
atypical hemolytic-uremic syndrome with C3 anomaly Hemoglobinuria paroxysmal
1 gene
Show details
1 of 1 corroborated by 2+ sources
C3(2)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 1 →
atypical hemolytic-uremic syndrome with C3 anomaly Paroxysmal nocturnal hemoglobinuria
1 gene
Show details
1 of 1 corroborated by 2+ sources
C3(2)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 1 →
Autism, x-linked Central apnea
1 gene
Show details
1 of 1 corroborated by 2+ sources
MECP2(2)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 61 →
Autism, x-linked Neonatal encephalopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
MECP2(2)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 61 →
Autism, x-linked X-linked myopathy with excessive autophagy
1 gene
Show details
1 of 1 corroborated by 2+ sources
RPL10(5)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. —
autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency Idiopathic diabetes
1 gene
Show details
1 of 1 corroborated by 2+ sources
CTLA4(2)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. —
Autoinflammation, antibody deficiency, and immune dysregulation Cold autoinflammatory syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
PLCG2(5)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 192 →
Autoinflammation, immune dysregulation, and eosinophilia Breast implant-associated anaplastic large cell lymphoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
JAK1(5)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 3 →
Autosomal dominant sensorineural deafness Infantile neurological cutaneous and articular syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
NLRP3(3)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 192 →
Autosomal dominant sensorineural deafness Cinca syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
NLRP3(4)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 192 →
Autosomal dominant sensorineural deafness Hearing loss with hypertrophic cardiomyopathy
1 gene
Show details
MYO6(1)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 192 →
Autosomal dominant sensorineural deafness Peripheral neuropathy with sensorineural hearing impairment syndrome
1 gene
Show details
GJB3(1)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. —
Autosomal dominant sensorineural deafness Sebastian syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
MYH9(2)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. —
autosomal recessive cutis laxa type 2D Cyclin-dependent kinase-like 5 deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
ATP6V1A(2)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. —
BAP1-related tumor predisposition syndrome Tumor predisposition syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
BAP1(4)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 389 →
Benign infantile epilepsy neonatal-onset developmental and epileptic encephalopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
KCNQ2(3)
0.143 1.000 3.90e-4 8.67e-4 ✓ sig. Cluster 165 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.