Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Hyperplasia Primary aldosteronism
3 genes
Show details
B3GLCT(1), RXFP2(1), NDP(1)
0.067 0.188 4.06e-6 2.14e-5 ✓ sig. Cluster 143 →
Endometrial neoplasms Polycystic ovary syndrome
11 genes
Show details
8 of 11 corroborated by 2+ sources
BCL11A(3), CACNA2D3(1), MSH6(2), CYP19A1(3), PPARG(1), AOPEP(1), AKR1C3(2), MGAT5B(3), AKR1C1(2), STAR(2), SRSF10(2)
0.032 0.083 4.06e-6 2.14e-5 ✓ sig. Cluster 67 →
Congenital aniridia Wilms tumor
2 genes
Show details
2 of 2 corroborated by 2+ sources
WT1(5), PAX6(2)
0.061 1.000 4.18e-6 2.20e-5 ✓ sig. Cluster 35 →
Osteopathia striata with cranial sclerosis Wilms tumor
2 genes
Show details
2 of 2 corroborated by 2+ sources
CTNNB1(3), AMER1(6)
0.061 1.000 4.18e-6 2.20e-5 ✓ sig. —
Aplastic anemia Erythroid hypoplasia
2 genes
Show details
DIPK1A(1), RPL5(1)
0.061 1.000 4.18e-6 2.20e-5 ✓ sig. —
Aplastic anemia Ovarian agenesis
2 genes
Show details
DIPK1A(1), RPL5(1)
0.061 1.000 4.18e-6 2.20e-5 ✓ sig. —
Congenital hereditary endothelial dystrophy Corneal dystrophy
2 genes
Show details
2 of 2 corroborated by 2+ sources
OVOL2(4), SLC4A11(6)
0.061 1.000 4.18e-6 2.20e-5 ✓ sig. Cluster 75 →
Congenital stromal corneal dystrophy Corneal dystrophy
2 genes
Show details
2 of 2 corroborated by 2+ sources
DCN(6), SPARCL1(3)
0.061 1.000 4.18e-6 2.20e-5 ✓ sig. Cluster 75 →
Corneal dystrophy Corneal endothelial dystrophy
2 genes
Show details
2 of 2 corroborated by 2+ sources
SLC4A11(6), KRT3(4)
0.061 1.000 4.18e-6 2.20e-5 ✓ sig. Cluster 75 →
Corneal neovascularization Diabetic angiopathies
3 genes
Show details
2 of 3 corroborated by 2+ sources
SERPINF1(2), VEGFA(2), IL1RN(1)
0.068 0.167 4.31e-6 2.27e-5 ✓ sig. —
Corneal neovascularization Diabetic peripheral angiopathy
3 genes
Show details
1 of 3 corroborated by 2+ sources
SERPINF1(1), VEGFA(2), IL1RN(1)
0.068 0.167 4.31e-6 2.27e-5 ✓ sig. —
Dyslipidemias Hypertriglyceridemia
3 genes
Show details
3 of 3 corroborated by 2+ sources
LPL(3), PPARA(2), PLTP(2)
0.068 0.167 4.31e-6 2.27e-5 ✓ sig. —
Diencephalic mesencephalic junction dysplasia Marshall syndrome
2 genes
Show details
1 of 2 corroborated by 2+ sources
PCDH12(5), RNF14(1)
0.095 0.667 4.32e-6 2.27e-5 ✓ sig. —
Erythromelalgia Hereditary sensory and autonomic neuropathy
2 genes
Show details
2 of 2 corroborated by 2+ sources
SCN11A(6), SCN9A(6)
0.095 0.667 4.32e-6 2.27e-5 ✓ sig. —
Hyperparathyroidism Hypoparathyroidism
2 genes
Show details
2 of 2 corroborated by 2+ sources
PTH(3), GCM2(6)
0.095 0.667 4.32e-6 2.27e-5 ✓ sig. —
B-lymphoblastic leukemia/lymphoma Myelogenous leukemia
2 genes
Show details
2 of 2 corroborated by 2+ sources
BCR(2), ABL1(2)
0.095 0.667 4.32e-6 2.27e-5 ✓ sig. —
Burkitt lymphoma Clonal cytopenia of undetermined significance
2 genes
Show details
2 of 2 corroborated by 2+ sources
RUNX1(2), ARID1A(2)
0.095 0.667 4.32e-6 2.27e-5 ✓ sig. —
Leukemia Lipoma
3 genes
Show details
PTEN(1), BAP1(1), ACTRT3(1)
0.057 0.250 4.39e-6 2.30e-5 ✓ sig. —
Hypercapnia Hypoxia
2 genes
Show details
PDYN(1), NPPA(1)
0.059 1.000 4.45e-6 2.34e-5 ✓ sig. —
Peeling skin syndrome with leukonychia and acral punctate keratoses Uveitis
2 genes
Show details
2 of 2 corroborated by 2+ sources
CAST(7), ERAP1(2)
0.059 1.000 4.45e-6 2.34e-5 ✓ sig. —
Curling ulcer Hepatic insufficiency
2 genes
Show details
2 of 2 corroborated by 2+ sources
TGFB1(2), NOS2(2)
0.143 0.333 4.55e-6 2.38e-5 ✓ sig. —
Hypercalciuria Hypocalcemia
2 genes
Show details
2 of 2 corroborated by 2+ sources
POMC(2), PTH(2)
0.143 0.333 4.55e-6 2.38e-5 ✓ sig. —
Hyperproinsulinemia Pituitary neoplasms
2 genes
Show details
2 of 2 corroborated by 2+ sources
PRL(2), DRD2(2)
0.143 0.333 4.55e-6 2.38e-5 ✓ sig. —
Cataract-microcornea syndrome Sutural cataract
2 genes
Show details
2 of 2 corroborated by 2+ sources
CRYBB2(3), GJA8(4)
0.143 0.333 4.55e-6 2.38e-5 ✓ sig. Cluster 43 →
Benign infantile epilepsy Epilepsy of infancy with migrating focal seizures
2 genes
Show details
2 of 2 corroborated by 2+ sources
KCNQ2(3), SCN2A(3)
0.143 0.333 4.55e-6 2.38e-5 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.