Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Dejerine-lichtheim phenomenon Dysphasia
2 genes
Show details
PLAT(1), L1CAM(1)
0.400 1.000 5.06e-8 3.71e-7 ✓ sig. Cluster 258 →
Delta-beta thalassemia Lepore-beta-thalassemia syndrome
2 genes
Show details
2 of 2 corroborated by 2+ sources
HBB(3), HBD(3)
0.400 1.000 5.06e-8 3.71e-7 ✓ sig. Cluster 19 →
17 alpha-hydroxyprogesterone aldolase deficiency Male pseudohypopituitarism
2 genes
Show details
2 of 2 corroborated by 2+ sources
AKR1C2(2), AKR1C4(2)
0.400 1.000 5.06e-8 3.71e-7 ✓ sig. Cluster 344 →
22q13 monosomy syndrome 22q13.3 deletion syndrome
2 genes
Show details
2 of 2 corroborated by 2+ sources
INS(2), SHANK3(2)
0.400 1.000 5.06e-8 3.71e-7 ✓ sig. Cluster 112 →
Acrofacial dysostosis Curry-hall syndrome
2 genes
Show details
2 of 2 corroborated by 2+ sources
EVC(2), EVC2(3)
0.400 1.000 5.06e-8 3.71e-7 ✓ sig. Cluster 289 →
Alport syndrome, x-linked X-linked diffuse leiomyomatosis with alport syndrome
2 genes
Show details
2 of 2 corroborated by 2+ sources
COL4A5(4), COL4A6(2)
0.400 1.000 5.06e-8 3.71e-7 ✓ sig. Cluster 49 →
Aphasia Dysphasia
2 genes
Show details
2 of 2 corroborated by 2+ sources
PLAT(2), L1CAM(2)
0.400 1.000 5.06e-8 3.71e-7 ✓ sig. Cluster 258 →
Arginine vasopressin resistance Neurogenic diabetes insipidus
2 genes
Show details
2 of 2 corroborated by 2+ sources
AQP2(6), AVPR2(5)
0.400 1.000 5.06e-8 3.71e-7 ✓ sig. —
Arginine vasopressin resistance Nephrogenic diabetes insipidus
2 genes
Show details
2 of 2 corroborated by 2+ sources
AQP2(3), AVPR2(3)
0.400 1.000 5.06e-8 3.71e-7 ✓ sig. —
Combined molybdoflavoprotein enzyme deficiency Glycoprotein ia deficiency
2 genes
Show details
ITGA2(1), MOCS2(1)
0.400 1.000 5.06e-8 3.71e-7 ✓ sig. —
Commisural aphasia Dysphasia
2 genes
Show details
PLAT(1), L1CAM(1)
0.400 1.000 5.06e-8 3.71e-7 ✓ sig. Cluster 258 →
Congenital aniridia Wagr syndrome
2 genes
Show details
2 of 2 corroborated by 2+ sources
WT1(4), PAX6(4)
0.400 1.000 5.06e-8 3.71e-7 ✓ sig. Cluster 35 →
Congenital bilateral absence of vas deferens Obstructive azoospermia
2 genes
Show details
2 of 2 corroborated by 2+ sources
CFTR(5), ADGRG2(4)
0.400 1.000 5.06e-8 3.71e-7 ✓ sig. —
Congenital cerebral aneurysm Developmental venous anomaly
2 genes
Show details
PDCD10(1), CCM2(1)
0.400 1.000 5.06e-8 3.71e-7 ✓ sig. Cluster 308 →
Congenital malformation of cerebral vessels Developmental venous anomaly
2 genes
Show details
PDCD10(1), CCM2(1)
0.400 1.000 5.06e-8 3.71e-7 ✓ sig. Cluster 308 →
Aniridia Anophthalmia
3 genes
Show details
3 of 3 corroborated by 2+ sources
ELP4(5), PAX6(4), SOX2(2)
0.143 0.333 5.01e-8 3.71e-7 ✓ sig. —
Autoinflammatory syndrome Hyper-immunoglobulin d syndrome
3 genes
Show details
1 of 3 corroborated by 2+ sources
MVK(3), HMGCR(1), MMAB(1)
0.077 0.750 5.10e-8 3.74e-7 ✓ sig. —
Crest syndrome Scleroderma
4 genes
Show details
4 of 4 corroborated by 2+ sources
CAV1(2), IRF5(3), STAT4(3), CCN2(2)
0.087 0.190 5.12e-8 3.75e-7 ✓ sig. Cluster 25 →
Complex cortical dysplasia with other brain malformations Congenital fibrosis of extraocular muscles
3 genes
Show details
3 of 3 corroborated by 2+ sources
TUBB(3), TUBB3(4), TUBB2B(6)
0.136 0.375 5.14e-8 3.76e-7 ✓ sig. Cluster 176 →
Body mass index Body weight
3 genes
Show details
3 of 3 corroborated by 2+ sources
FTO(2), MC4R(3), PCSK1(2)
0.136 0.375 5.14e-8 3.76e-7 ✓ sig. —
Cystitis Interstitial cystitis
4 genes
Show details
4 of 4 corroborated by 2+ sources
NGF(2), CXCL10(2), CXCL9(2), CXCL11(2)
0.077 0.267 5.22e-8 3.82e-7 ✓ sig. —
Bronchial disease Bronchitis
4 genes
Show details
CASP14(1), HOMEZ(1), PPP2R5E(1), TEKTL1(1)
0.083 0.222 5.24e-8 3.83e-7 ✓ sig. Cluster 1 →
Hemangiosarcoma Transitional cell carcinoma
4 genes
Show details
TP53(1), CSF3(1), HRAS(1), CCND1(1)
0.083 0.222 5.24e-8 3.83e-7 ✓ sig. —
Byzanthine arch palate Mitral valve prolapse
4 genes
Show details
FBN1(1), PLOD1(1), NSDHL(1), MAP2K2(1)
0.070 0.308 5.34e-8 3.90e-7 ✓ sig. —
Nasopharyngeal carcinoma Sezary syndrome
4 genes
Show details
1 of 4 corroborated by 2+ sources
PTEN(1), TP53(3), ARID1A(1), CDKN2A(1)
0.087 0.182 5.37e-8 3.92e-7 ✓ sig. Cluster 3 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.