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Gene Gene information from NCBI Gene database.
Entrez ID 3627
Gene name C-X-C motif chemokine ligand 10
Gene symbol CXCL10
Synonyms (NCBI Gene)
C7IFI10INP10IP-10SCYB10crg-2gIP-10mob-1
Chromosome 4
Chromosome location 4q21.1
Summary This antimicrobial gene encodes a chemokine of the CXC subfamily and ligand for the receptor CXCR3. Binding of this protein to CXCR3 results in pleiotropic effects, including stimulation of monocytes, natural killer and T-cell migration, and modulation of
miRNA miRNA information provided by mirtarbase database.
121 Show/Hide all (121)
miRTarBase ID miRNA Experiments Reference
MIRT438112 hsa-miR-21-5p qRT-PCR 24889251
MIRT438109 hsa-miR-21-5p qRT-PCR 24889251
MIRT438110 hsa-miR-21-5p qRT-PCR 24889251
MIRT438108 hsa-miR-21-5p qRT-PCR 24889251
MIRT438112 hsa-miR-21-5p qRT-PCR 24889251
Transcription factors Transcription factors information provided by TRRUST V2 database.
9 Show/Hide all (9)
Transcription factor Regulation Reference
IRF1 Activation 19342664
IRF3 Activation 18691624;24257594
IRF7 Activation 24701034
NFKB1 Activation 16982926;20164184;24701034
NFKB1 Unknown 16818736;19479051;24257594
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
69 Show/Hide all (69)
GO ID Ontology Definition Evidence Reference
GO:0002690 Process Positive regulation of leukocyte chemotaxis IEA
GO:0005102 Function Signaling receptor binding TAS 10201891
GO:0005125 Function Cytokine activity IEA
GO:0005515 Function Protein binding IPI 18275857, 21314817, 28381538
GO:0005576 Component Extracellular region IDA 20041150
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
147310 10637 ENSG00000169245
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P02778
Protein name C-X-C motif chemokine 10 (10 kDa interferon gamma-induced protein) (Gamma-IP10) (IP-10) (Small-inducible cytokine B10) [Cleaved into: CXCL10(1-73)]
Protein function Pro-inflammatory cytokine that is involved in a wide variety of processes such as chemotaxis, differentiation, and activation of peripheral immune cells, regulation of cell growth, apoptosis and modulation of angiostatic effects (PubMed:11157474
PDB 1LV9 , 1O7Y , 1O7Z , 1O80 , 8K2X
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00048 IL8 28 → 89 Small cytokines (intecrine/chemokine), interleukin-8 like Domain
Tissue specificity TISSUE SPECIFICITY: Mainly secreted by monocytes, endothelial cells as well as fibroblasts. Expressed by epithelial cells in thymus (PubMed:11157474). Microglial cells produce CXCL10 in response to viral stimulation (PubMed:12663757). {ECO:0000269|PubMed:
Sequence
Sequence length 98
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
KEGG Pathway Reactome Pathway
Cytokine-cytokine receptor interaction Chemokine receptors bind chemokines
Viral protein interaction with cytokine and cytokine receptor G alpha (i) signalling events
Chemokine signaling pathway Interleukin-10 signaling
Toll-like receptor signaling pathway  
RIG-I-like receptor signaling pathway  
Cytosolic DNA-sensing pathway  
IL-17 signaling pathway  
TNF signaling pathway  
Hepatitis C  
Influenza A  
Epstein-Barr virus infection  
Coronavirus disease - COVID-19  
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
16
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Show/Hide Unknown Diseases (16)
Phenotype Name Clinical Significance Source Reference Evidence Score
BILIARY CIRRHOSIS — Disgenet —
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BRAIN INJURIES — CTD 21549006
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
BRAIN ISCHEMIA — CTD, Disgenet
CTD, Disgenet
15829914
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CARDIOVASCULAR DISEASES — CTD, Disgenet
CTD, Disgenet
29114965
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
CELIAC DISEASE — CTD, Disgenet
CTD, Disgenet
30097691
★★★★★
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Show/Hide Text Mining Associations (662)
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Acute lymphocytic leukemia Lymphocytic Leukemia BEFREE 22058116
★★★★★
★☆☆☆☆
Found in Text Mining only
Addison Disease Addison`s Disease BEFREE 22989785
★★★★★
★☆☆☆☆
Found in Text Mining only
Adenocarcinoma of lung (disorder) Lung adenocarcinoma BEFREE 31221150
★★★★★
★☆☆☆☆
Found in Text Mining only
Adrenal Gland Pheochromocytoma Adrenal Gland Pheochromocytoma BEFREE 25415223
★★★★★
★☆☆☆☆
Found in Text Mining only
Adrenocortical carcinoma Adrenocortical carcinoma BEFREE 22989785
★★★★★
★☆☆☆☆
Found in Text Mining only
Adult Diffuse Large B-Cell Lymphoma B-cell Lymphoma BEFREE 27943355
★★★★★
★☆☆☆☆
Found in Text Mining only
Adult Hodgkin Lymphoma Hodgkin Lymphoma BEFREE 12115499, 15751051
★★★★★
★☆☆☆☆
Found in Text Mining only
Adult type dermatomyositis Dermatomyositis BEFREE 28487565, 30101523
★★★★★
★☆☆☆☆
Found in Text Mining only
Age related macular degeneration Age-related macular degeneration BEFREE 28438165, 28765149, 30552890
★★★★★
★☆☆☆☆
Found in Text Mining only
Aggressive Periodontitis Aggressive Periodontitis BEFREE 12608917
★★★★★
★☆☆☆☆
Found in Text Mining only