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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Dermatopathia pigmentosa reticularis Junctional epidermolysis bullosa
1 gene
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1 of 1 corroborated by 2+ sources
KRT14(6)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Hemangiosarcoma immune dysregulation, autoimmunity, and autoinflammation
1 gene
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1 of 1 corroborated by 2+ sources
PLCG1(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. Cluster 3 →
Clinodactyly Intellectual developmental disorder cataracts myopathy
1 gene
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1 of 1 corroborated by 2+ sources
ZBTB20(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Chorea Intellectual developmental disorder seizures movement
1 gene
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1 of 1 corroborated by 2+ sources
PDE2A(4)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. Cluster 1 →
Developmental regression intellectual disability, autosomal dominant 42
1 gene
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1 of 1 corroborated by 2+ sources
GNB1(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Interstitial systitis Potassium deficiency
1 gene
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ADRB2(1)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Gross motor development delay Iodide peroxidase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
TPO(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
keutel syndrome Spondyloepiphyseal dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
MGP(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
keutel syndrome Uremia
1 gene
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1 of 1 corroborated by 2+ sources
MGP(3)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Developmental regression krabbe disease
1 gene
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1 of 1 corroborated by 2+ sources
GALC(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Lafora body disease Potassium deficiency
1 gene
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1 of 1 corroborated by 2+ sources
PRDM8(3)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Junctional epidermolysis bullosa Laryngo-onycho-cutaneous syndrome
1 gene
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1 of 1 corroborated by 2+ sources
LAMA3(7)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
LIPE-related familial partial lipodystrophy Lipodystrophy
1 gene
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1 of 1 corroborated by 2+ sources
LIPE(3)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. Cluster 71 →
Diabetic nephropathy type 2 lissencephaly spectrum disorder with complex brainstem malformation
1 gene
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1 of 1 corroborated by 2+ sources
MACF1(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. Cluster 73 →
Lipodystrophy mandibular hypoplasia-deafness-progeroid syndrome
1 gene
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1 of 1 corroborated by 2+ sources
POLD1(3)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Hemangiosarcoma Merkel cell carcinoma
1 gene
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MYC(1)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. Cluster 3 →
Gross motor development delay microcephalic osteodysplastic dysplasia, Saul-Wilson type
1 gene
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1 of 1 corroborated by 2+ sources
COG4(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
microcephalic osteodysplastic primordial dwarfism type II Seckel syndrome
1 gene
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1 of 1 corroborated by 2+ sources
PCNT(4)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. Cluster 101 →
microcephaly with or without short stature Seckel syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CEP152(6)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. Cluster 101 →
Anorexia Minor epilepsy
1 gene
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1 of 1 corroborated by 2+ sources
NPY(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Developmental regression mucopolysaccharidosis type 3A
1 gene
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1 of 1 corroborated by 2+ sources
SGSH(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
mucopolysaccharidosis type 4B Spondyloepiphyseal dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
GLB1(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Aortic dissection multiple self-healing squamous epithelioma
1 gene
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1 of 1 corroborated by 2+ sources
TGFBR1(3)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
multiple self-healing squamous epithelioma Uremia
1 gene
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1 of 1 corroborated by 2+ sources
TGFBR1(3)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Esophageal and gastric varices Potassium deficiency
1 gene
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1 of 1 corroborated by 2+ sources
SST(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.