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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Deglutition disorder nemaline myopathy 2
1 gene
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1 of 1 corroborated by 2+ sources
NEB(2)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. Cluster 51 →
Cardiovascular abnormalities nephronophthisis 16
1 gene
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1 of 1 corroborated by 2+ sources
ANKS6(3)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. Cluster 136 →
neurodegeneration, childhood-onset, with cerebellar ataxia and cognitive decline Post-operative acute kidney injury
1 gene
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1 of 1 corroborated by 2+ sources
CAPRIN1(2)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
neurodevelopmental disorder with language impairment, autism, and attention deficit-hyperactivity disorder Post-operative acute kidney injury
1 gene
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1 of 1 corroborated by 2+ sources
CAPRIN1(2)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Ductal carcinoma neurodevelopmental disorder with microcephaly and dysmorphic facies
1 gene
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1 of 1 corroborated by 2+ sources
SPOP(2)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Ductal carcinoma neurodevelopmental disorder with relative macrocephaly and with or without cardiac or endocrine anomalies
1 gene
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1 of 1 corroborated by 2+ sources
SPOP(2)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
neuronopathy, distal hereditary motor, type 7A Presynaptic congenital myasthenic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SLC5A7(4)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. Cluster 34 →
nijmegen breakage syndrome Stomatitis
1 gene
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1 of 1 corroborated by 2+ sources
NBN(3)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Hyperinsulinemic hypoglycemia obsolete hyperinsulinism due to short chain 3-hydroxylacyl-CoA dehydrogenase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
HADH(6)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Melanocytic nevus oculocutaneous albinism type 1
1 gene
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1 of 1 corroborated by 2+ sources
TYR(2)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Copper overload cirrhosis Osteofibrous dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
MET(5)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
arrhythmogenic cardiomyopathy with variable ectodermal abnormalities Leopard syndrome
1 gene
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1 of 1 corroborated by 2+ sources
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. Cluster 42 →
Arthrogryposis Dilatation of left cardiac ventricle
1 gene
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1 of 1 corroborated by 2+ sources
ACTC1(2)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Arthrogryposis dilated cardiomyopathy 1R
1 gene
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1 of 1 corroborated by 2+ sources
ACTC1(3)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Ataxia telangiectasia Hairy cell leukemia
1 gene
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1 of 1 corroborated by 2+ sources
BRAF(2)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Ataxia telangiectasia Middle ear cholesteatoma
1 gene
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IL2(1)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Ataxia telangiectasia Conjunctival telangiectasis
1 gene
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1 of 1 corroborated by 2+ sources
ATM(7)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. Cluster 348 →
Ataxia telangiectasia ATM-related cancer predisposition
1 gene
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1 of 1 corroborated by 2+ sources
ATM(7)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. Cluster 348 →
Autoimmune lymphoproliferative disorder autoimmune lymphoproliferative syndrome type 1
1 gene
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1 of 1 corroborated by 2+ sources
FASLG(6)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Autoimmune lymphoproliferative disorder autoimmune lymphoproliferative syndrome type 2A
1 gene
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1 of 1 corroborated by 2+ sources
CASP10(7)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. Cluster 18 →
Autoimmune lymphoproliferative disorder autoimmune lymphoproliferative syndrome type 2B
1 gene
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1 of 1 corroborated by 2+ sources
CASP8(6)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
autoimmune lymphoproliferative syndrome type 2B Melanocytic nevus
1 gene
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1 of 1 corroborated by 2+ sources
CASP8(2)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
autosomal dominant macrothrombocytopenia Macrothrombocytopenia
1 gene
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1 of 1 corroborated by 2+ sources
TUBA4A(3)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Avoidant restrictive food intake disorder Sleep disorder
1 gene
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1 of 1 corroborated by 2+ sources
APOE(2)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. Cluster 177 →
b-cell immunodeficiency, distal limb anomalies, and urogenital malformations Prostatic intraepithelial neoplasia
1 gene
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1 of 1 corroborated by 2+ sources
TOP2B(2)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. Cluster 193 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.