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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Methemoglobinemia methemoglobinemia, alpha type
2 genes
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2 of 2 corroborated by 2+ sources
HBA1(5), HBA2(2)
0.286 1.000 1.27e-7 8.71e-7 ✓ sig. Cluster 72 →
erythrocytosis, familial, 7 Methemoglobinemia
2 genes
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2 of 2 corroborated by 2+ sources
HBA1(5), HBA2(2)
0.286 1.000 1.27e-7 8.71e-7 ✓ sig. Cluster 72 →
Cerebellar ataxia, intellectual disability, and dysequilibrium Cerebellar ataxia, mental retardation, and dysequilibrium
2 genes
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2 of 2 corroborated by 2+ sources
WDR81(3), CA8(4)
0.286 1.000 1.27e-7 8.71e-7 ✓ sig. Cluster 317 →
Cerebellar ataxia, mental retardation, and dysequilibrium Dysequilibrium syndrome
2 genes
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2 of 2 corroborated by 2+ sources
WDR81(3), CA8(3)
0.286 1.000 1.27e-7 8.71e-7 ✓ sig. Cluster 317 →
Cerebral cavernous malformation Congenital cerebral aneurysm
2 genes
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2 of 2 corroborated by 2+ sources
PDCD10(7), CCM2(7)
0.286 1.000 1.27e-7 8.71e-7 ✓ sig. Cluster 308 →
Cerebral cavernous malformation Congenital malformation of cerebral vessels
2 genes
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2 of 2 corroborated by 2+ sources
PDCD10(7), CCM2(7)
0.286 1.000 1.27e-7 8.71e-7 ✓ sig. Cluster 308 →
Cerebrooculofacioskeletal syndrome De sanctis-cacchione syndrome
2 genes
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1 of 2 corroborated by 2+ sources
ERCC6(5), PGBD3(1)
0.286 1.000 1.27e-7 8.71e-7 ✓ sig. —
Cockayne syndrome De sanctis-cacchione syndrome
2 genes
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1 of 2 corroborated by 2+ sources
ERCC6(7), PGBD3(1)
0.286 1.000 1.27e-7 8.71e-7 ✓ sig. —
Turnpenny-fry syndrome Wolfram syndrome
2 genes
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1 of 2 corroborated by 2+ sources
PCGF2(5), CISD3(1)
0.286 1.000 1.27e-7 8.71e-7 ✓ sig. —
Axenfeld anomaly Axenfeld-rieger syndrome
2 genes
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2 of 2 corroborated by 2+ sources
FOXC1(6), PITX2(6)
0.286 1.000 1.27e-7 8.71e-7 ✓ sig. Cluster 253 →
Axenfeld-rieger syndrome Iridogoniodysgenesis
2 genes
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2 of 2 corroborated by 2+ sources
FOXC1(6), PITX2(6)
0.286 1.000 1.27e-7 8.71e-7 ✓ sig. Cluster 253 →
Benign infantile epilepsy Benign neonatal-infantile seizures
2 genes
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2 of 2 corroborated by 2+ sources
KCNQ2(3), SCN2A(2)
0.286 1.000 1.27e-7 8.71e-7 ✓ sig. Cluster 165 →
Eyelid disease Visual system disorder
2 genes
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EFEMP1(1), PNPT1(1)
0.286 1.000 1.27e-7 8.71e-7 ✓ sig. Cluster 146 →
Amegakaryocytic thrombocytopenia Thrombocytosis
2 genes
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2 of 2 corroborated by 2+ sources
MPL(5), THPO(6)
0.286 1.000 1.27e-7 8.71e-7 ✓ sig. Cluster 53 →
Amegakaryocytic thrombocytopenia Thrombocythemia
2 genes
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2 of 2 corroborated by 2+ sources
MPL(5), THPO(4)
0.286 1.000 1.27e-7 8.71e-7 ✓ sig. Cluster 53 →
Aortic arch syndrome Thromboangiitis obliterans
2 genes
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HLA-DRB1(1), HLA-A(1)
0.286 1.000 1.27e-7 8.71e-7 ✓ sig. Cluster 1 →
Congenital amegakaryocytic thrombocytopenia Thrombocytosis
2 genes
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2 of 2 corroborated by 2+ sources
MPL(6), THPO(7)
0.286 1.000 1.27e-7 8.71e-7 ✓ sig. Cluster 53 →
Congenital amegakaryocytic thrombocytopenia Thrombocythemia
2 genes
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2 of 2 corroborated by 2+ sources
MPL(7), THPO(6)
0.286 1.000 1.27e-7 8.71e-7 ✓ sig. Cluster 53 →
Eosinophilic leukemia Hypereosinophilic syndrome
2 genes
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2 of 2 corroborated by 2+ sources
PDGFRA(5), FIP1L1(3)
0.286 1.000 1.27e-7 8.71e-7 ✓ sig. Cluster 185 →
Hydatidiform mole Partial hydatidiform mole
2 genes
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2 of 2 corroborated by 2+ sources
NLRP7(6), KHDC3L(6)
0.286 1.000 1.27e-7 8.71e-7 ✓ sig. —
Blepharocheilodontic syndrome Cleft lip with or without cleft palate
2 genes
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2 of 2 corroborated by 2+ sources
CTNND1(7), CDH1(5)
0.286 1.000 1.27e-7 8.71e-7 ✓ sig. Cluster 312 →
Carotid artery thrombosis Glanzmann thrombasthenia
2 genes
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2 of 2 corroborated by 2+ sources
ITGB3(8), ITGA2B(8)
0.286 1.000 1.27e-7 8.71e-7 ✓ sig. Cluster 33 →
Carotid artery thrombosis platelet-type bleeding disorder 16
2 genes
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2 of 2 corroborated by 2+ sources
ITGB3(3), ITGA2B(3)
0.286 1.000 1.27e-7 8.71e-7 ✓ sig. Cluster 33 →
Carpal tunnel syndrome Congenital cartilage disorder
5 genes
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5 of 5 corroborated by 2+ sources
COL11A1(2), COL11A2(2), COMP(3), ADAMTSL2(2), COL10A1(2)
0.056 0.167 1.28e-7 8.84e-7 ✓ sig. Cluster 345 →
Avascular necrosis of bone Thromboembolism
3 genes
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3 of 3 corroborated by 2+ sources
F2(2), PLAT(2), F5(2)
0.125 0.250 1.31e-7 9.01e-7 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.