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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Cutis marmorata telangiectatica congenita Schwartz-jampel syndrome
1 gene
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1 of 1 corroborated by 2+ sources
GNA11(2)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. —
Sitosterolemia Xanthomatosis
1 gene
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1 of 1 corroborated by 2+ sources
ABCG5(7)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. —
Aphasia Spinal cord compression
1 gene
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1 of 1 corroborated by 2+ sources
PLAT(2)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. —
Postictal aphasia Spinal cord compression
1 gene
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PLAT(1)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. —
Cholesterol embolism Spinal cord compression
1 gene
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PLAT(1)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. —
Sweat gland disease Vipoma
1 gene
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1 of 1 corroborated by 2+ sources
SST(2)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 270 →
Hemimelia of limb Synpolydactyly
1 gene
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1 of 1 corroborated by 2+ sources
HOXD13(5)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 397 →
Blue cone monochromatism Deuteranomaly
1 gene
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1 of 1 corroborated by 2+ sources
OPN1MW(6)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 214 →
Developmental delay with language impairment and movement disorder Intellectual developmental disorder speech autism dysmorphic
1 gene
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1 of 1 corroborated by 2+ sources
TBR1(2)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 275 →
Diffuse mesangial sclerosis Digenic alport syndrome
1 gene
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1 of 1 corroborated by 2+ sources
COL4A4(2)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 49 →
Donnai-barrow syndrome Vitamin d deficiency
1 gene
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1 of 1 corroborated by 2+ sources
LRP2(5)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. —
Duane-radial ray syndrome Vissers-bodmer syndrome
1 gene
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1 of 1 corroborated by 2+ sources
IPO8(4)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 144 →
Dysphonia Mitochondrial hepatopathy
1 gene
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TWNK(1)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 97 →
Amyloid neuropathy Early onset alzheimers disease with behavioral disturbance
1 gene
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1 of 1 corroborated by 2+ sources
PSEN1(2)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 116 →
Early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome Thiel-behnke corneal dystrophy
1 gene
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1 of 1 corroborated by 2+ sources
TBCD(5)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. —
Early-onset progressive encephalopathy-hearing loss-pons hypoplasia-brain atrophy syndrome Lipoyltransferase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
LIPT2(2)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. —
Congenital scoliosis Ectopia lentis
1 gene
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1 of 1 corroborated by 2+ sources
FBN1(4)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 52 →
Crst syndrome Ectopia lentis
1 gene
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1 of 1 corroborated by 2+ sources
FBN1(4)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 52 →
Dilatation of pulmonary artery Ectopia lentis
1 gene
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1 of 1 corroborated by 2+ sources
FBN1(4)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 52 →
Epidermolytic ichthyosis Epidermolytic palmoplantar keratoderma
1 gene
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1 of 1 corroborated by 2+ sources
KRT1(5)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 230 →
Benign mucous membrane pemphigoid with ocular involvement Thromboangiitis obliterans
1 gene
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0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 1 →
Hyperthyroxinemia Thyroid hormone metabolism disorder
1 gene
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1 of 1 corroborated by 2+ sources
DIO1(4)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 182 →
Benign mucous membrane pemphigoid with ocular involvement Tongue cancer
1 gene
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1 of 1 corroborated by 2+ sources
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 1 →
Malignant hypertension Tonne-kalscheuer syndrome
1 gene
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1 of 1 corroborated by 2+ sources
REN(2)
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 95 →
Autoimmune pancreatitis Tonsil cancer
1 gene
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1 of 1 corroborated by 2+ sources
0.200 0.500 3.90e-4 8.67e-4 ✓ sig. Cluster 1 →

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.