Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Cardiovascular abnormalities Urinary retention
1 gene
Show details
1 of 1 corroborated by 2+ sources
EDN1(2)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Retinitis pigmentosa-deafness syndrome Usher syndrome type 2D
1 gene
Show details
1 of 1 corroborated by 2+ sources
WHRN(2)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Retinitis pigmentosa-deafness syndrome Usher syndrome type 3
1 gene
Show details
1 of 1 corroborated by 2+ sources
CLRN1(2)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Vitamin b12 deficiency Vitamin b12-unresponsive methylmalonic acidemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
FUT2(3)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. Cluster 106 →
Posterior subcapsular cataract Wormian bones-micrognathia-abnormal dentition-progeroid syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
LEMD2(2)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Trichothiodystrophy xeroderma pigmentosum group B
1 gene
Show details
1 of 1 corroborated by 2+ sources
ERCC3(8)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. Cluster 86 →
Trichothiodystrophy xeroderma pigmentosum group D
1 gene
Show details
1 of 1 corroborated by 2+ sources
ERCC2(6)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. Cluster 86 →
Congenital fiber type disproportion myopathy Zebra body myopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
ACTA1(3)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Bisphosphoglycerate mutase deficiency Hereditary hemolytic anemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
BPGM(2)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. Cluster 105 →
Bohring-opitz syndrome Hypertrichosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
ASXL1(6)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Bulbo-spinal atrophy, x-linked Prostatic intraepithelial neoplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
AR(2)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. Cluster 193 →
Cardiac anomalies - developmental delay - facial dysmorphism syndrome Transposition of the great arteries
1 gene
Show details
1 of 1 corroborated by 2+ sources
MED13L(3)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Cardiogenetic disease Short qt syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
CACNB2(2)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Carnitine deficiency Short qt syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC22A5(3)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Autoimmune lymphoproliferative disorder Caspase 8 deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
CASP8(6)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Caspase 8 deficiency Melanocytic nevus
1 gene
Show details
1 of 1 corroborated by 2+ sources
CASP8(2)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Erythrocyte lactate transporter defect Hyperinsulinemic hypoglycemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC16A1(3)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Factor vii deficiency Hematuria
1 gene
Show details
1 of 1 corroborated by 2+ sources
F7(5)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Autoimmune lymphoproliferative disorder FAS-related autoimmune lymphoproliferative immune disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
FAS(7)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Fatty acid and ketone body metabolism disorder Hyperinsulinemic hypoglycemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC16A1(4)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Fatty acid oxidation and ketone body metabolism disorder Hyperinsulinemic hypoglycemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC16A1(3)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Cardiovascular abnormalities Gata2 deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
GATA2(4)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. Cluster 136 →
Gaucher disease due to saposin C deficiency Retinitis pigmentosa-deafness syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
PSAP(2)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. Cluster 118 →
Genetic transient congenital hypothyroidism Idiopathic basal ganglia calcification
1 gene
Show details
1 of 1 corroborated by 2+ sources
DUOX2(2)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —
Cushing's disease Glucocorticoid receptor deficiency/resistance
1 gene
Show details
1 of 1 corroborated by 2+ sources
NR3C1(5)
0.083 1.000 7.14e-4 1.34e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.