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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Coronary stenosis Myosin storage myopathy
1 gene
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1 of 1 corroborated by 2+ sources
MYH7(3)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 89 →
Biventricular noncompaction cardiomyopathy Coronary stenosis
1 gene
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1 of 1 corroborated by 2+ sources
MYH7(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 89 →
Coronary stenosis MYH7-related skeletal myopathy
1 gene
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1 of 1 corroborated by 2+ sources
MYH7(3)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 89 →
Coronary stenosis dilated cardiomyopathy 1S
1 gene
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1 of 1 corroborated by 2+ sources
MYH7(3)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 89 →
craniosynostosis 2 Dental enamel hypoplasia
1 gene
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1 of 1 corroborated by 2+ sources
MSX2(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Deafness with cataract, intellectual disability, and polyneuropathy Patent ductus arteriosus
1 gene
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1 of 1 corroborated by 2+ sources
PSMC3(4)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Delayed sleep phase syndrome Seasonal affective disorder
1 gene
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1 of 1 corroborated by 2+ sources
CRY1(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Dental enamel hypoplasia Testicular regression syndrome
1 gene
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1 of 1 corroborated by 2+ sources
DHX37(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Central hypothyroidism Dental enamel hypoplasia
1 gene
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1 of 1 corroborated by 2+ sources
ROBO1(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Hereditary motor and sensory neuropathies Spinocerebellar ataxia
4 genes
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3 of 4 corroborated by 2+ sources
MME(6), SETX(6), PLD3(5), PRX(1)
0.024 0.061 1.03e-3 1.74e-3 ✓ sig. —
Hypertensive nephropathy Proliferative diabetic retinopathy
2 genes
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PRKAG2(1), WDR72(1)
0.036 0.100 9.83e-4 1.68e-3 ✓ sig. —
Proliferative diabetic retinopathy Retinopathy of prematurity
2 genes
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1 of 2 corroborated by 2+ sources
SERPINE1(1), HLA-B(2)
0.036 0.100 9.83e-4 1.68e-3 ✓ sig. —
Growth hormone-secreting pituitary adenoma Primary bilateral macronodular adrenal hyperplasia
1 gene
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1 of 1 corroborated by 2+ sources
GNAS(2)
0.125 0.333 9.74e-4 1.67e-3 ✓ sig. —
Congenital respiratory system anomaly Cyanosis
1 gene
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1 of 1 corroborated by 2+ sources
TGFB2(2)
0.125 0.333 9.74e-4 1.67e-3 ✓ sig. —
Corticobasal syndrome Dowling degos disease
1 gene
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1 of 1 corroborated by 2+ sources
ADAM10(2)
0.125 0.333 9.74e-4 1.67e-3 ✓ sig. —
Aortic rupture Coumarin resistance
1 gene
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1 of 1 corroborated by 2+ sources
VKORC1(3)
0.125 0.333 9.74e-4 1.67e-3 ✓ sig. —
Bronchus cancer Coumarin resistance
1 gene
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1 of 1 corroborated by 2+ sources
CYP2A6(3)
0.125 0.333 9.74e-4 1.67e-3 ✓ sig. Cluster 294 →
Desbuquois dysplasia Pseudoxanthoma elasticum
1 gene
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1 of 1 corroborated by 2+ sources
XYLT1(4)
0.125 0.333 9.74e-4 1.67e-3 ✓ sig. Cluster 128 →
Aortic rupture Combined deficiency of vitamin k-dependent clotting factors
1 gene
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1 of 1 corroborated by 2+ sources
VKORC1(5)
0.125 0.333 9.74e-4 1.67e-3 ✓ sig. —
Coronal craniosynostosis Extraskeletal myxoid chondrosarcoma
1 gene
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1 of 1 corroborated by 2+ sources
TCF12(2)
0.125 0.333 9.74e-4 1.67e-3 ✓ sig. Cluster 127 →
Bronchus cancer familial sleep-related hypermotor epilepsy
1 gene
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1 of 1 corroborated by 2+ sources
CHRNA4(2)
0.125 0.333 9.74e-4 1.67e-3 ✓ sig. —
familial sleep-related hypermotor epilepsy Respiratory system cancer
1 gene
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1 of 1 corroborated by 2+ sources
CHRNA4(2)
0.125 0.333 9.74e-4 1.67e-3 ✓ sig. —
Dias-logan syndrome Hemoglobin e disease
1 gene
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1 of 1 corroborated by 2+ sources
BCL11A(4)
0.125 0.333 9.74e-4 1.67e-3 ✓ sig. —
Congenital iris coloboma Dyschromatosis symmetrica hereditaria
1 gene
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1 of 1 corroborated by 2+ sources
ABCB6(7)
0.125 0.333 9.74e-4 1.67e-3 ✓ sig. —
Intracranial thrombosis Three-vessel coronary artery disease
1 gene
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1 of 1 corroborated by 2+ sources
ABO(2)
0.125 0.333 9.74e-4 1.67e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.