Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Ischemic stroke Thrombosis
8 genes
Show details
8 of 8 corroborated by 2+ sources
PLAU(2), F2(2), TNF(2), PLAT(2), F5(2), PROC(2), PROS1(2), THBD(2)
0.090 0.178 1.60e-12 1.90e-11 ✓ sig. Cluster 55 →
Lacrimoauriculodentodigital syndrome Ladd syndrome
3 genes
Show details
3 of 3 corroborated by 2+ sources
FGFR3(5), FGF10(6), FGFR2(7)
0.750 1.000 1.64e-12 1.92e-11 ✓ sig. —
Cold-induced sweating syndrome Crisponi syndrome
3 genes
Show details
3 of 3 corroborated by 2+ sources
KLHL7(4), CLCF1(6), CRLF1(7)
0.750 1.000 1.64e-12 1.92e-11 ✓ sig. Cluster 331 →
collagen 6-related myopathy Collagen vi muscular dystrophy
3 genes
Show details
3 of 3 corroborated by 2+ sources
COL6A3(3), COL6A1(3), COL6A2(3)
0.750 1.000 1.64e-12 1.92e-11 ✓ sig. Cluster 393 →
Combined immunodeficiency, enteropathy spectrum Gastrointestinal defects and immunodeficiency syndrome
3 genes
Show details
2 of 3 corroborated by 2+ sources
PI4KA(3), MCFD2(1), TTC7A(4)
0.750 1.000 1.64e-12 1.92e-11 ✓ sig. Cluster 267 →
Congenital afibrinogenemia Congenital fibrinogen deficiency
3 genes
Show details
3 of 3 corroborated by 2+ sources
FGA(4), FGG(4), FGB(4)
0.750 1.000 1.64e-12 1.92e-11 ✓ sig. Cluster 149 →
Congenital afibrinogenemia Congenital hypofibrinogenemia
3 genes
Show details
3 of 3 corroborated by 2+ sources
FGA(3), FGG(3), FGB(2)
0.750 1.000 1.64e-12 1.92e-11 ✓ sig. Cluster 149 →
Congenital afibrinogenemia Hypofibrinogenemia
3 genes
Show details
3 of 3 corroborated by 2+ sources
FGA(5), FGG(4), FGB(4)
0.750 1.000 1.64e-12 1.92e-11 ✓ sig. Cluster 149 →
Congenital fibrinogen deficiency Congenital hypofibrinogenemia
3 genes
Show details
3 of 3 corroborated by 2+ sources
FGA(3), FGG(3), FGB(3)
0.750 1.000 1.64e-12 1.92e-11 ✓ sig. Cluster 149 →
Congenital fibrinogen deficiency Hypofibrinogenemia
3 genes
Show details
3 of 3 corroborated by 2+ sources
FGA(5), FGG(4), FGB(4)
0.750 1.000 1.64e-12 1.92e-11 ✓ sig. Cluster 149 →
Congenital hypofibrinogenemia Hypofibrinogenemia
3 genes
Show details
3 of 3 corroborated by 2+ sources
FGA(3), FGG(3), FGB(3)
0.750 1.000 1.64e-12 1.92e-11 ✓ sig. Cluster 149 →
Hearing loss with stapes fixation X-linked hearing loss with perilymphatic gusher
3 genes
Show details
3 of 3 corroborated by 2+ sources
GJB6(3), GJB2(3), POU3F4(4)
0.750 1.000 1.64e-12 1.92e-11 ✓ sig. Cluster 210 →
Hemoglobin barts fetalis syndrome Hemoglobin h disease
3 genes
Show details
2 of 3 corroborated by 2+ sources
HBA1(5), HBA2(5), ATRX(1)
0.750 1.000 1.64e-12 1.92e-11 ✓ sig. Cluster 72 →
Hemoglobin m disease Unstable hemoglobin disease
3 genes
Show details
3 of 3 corroborated by 2+ sources
HBA1(5), HBA2(4), HBB(5)
0.750 1.000 1.64e-12 1.92e-11 ✓ sig. Cluster 72 →
Hepatic methionine adenosyltransferase deficiency S-adenosylhomocysteine hydrolase deficiency
3 genes
Show details
2 of 3 corroborated by 2+ sources
AHCY(2), MAT1A(2), GNMT(1)
0.750 1.000 1.64e-12 1.92e-11 ✓ sig. Cluster 83 →
Hereditary xerocytosis Xerocytosis
3 genes
Show details
3 of 3 corroborated by 2+ sources
PIEZO1(7), SLC4A1(2), KCNN4(6)
0.750 1.000 1.64e-12 1.92e-11 ✓ sig. —
Hypercalcemic tumoral calcinosis Hyperphosphatemic tumoral calcinosis
3 genes
Show details
3 of 3 corroborated by 2+ sources
KL(2), GALNT3(2), FGF23(2)
0.750 1.000 1.64e-12 1.92e-11 ✓ sig. Cluster 407 →
Eichsfeld type congenital muscular dystrophy Rigid spine muscular dystrophy
3 genes
Show details
3 of 3 corroborated by 2+ sources
ACTA1(3), HMGCS1(2), SELENON(4)
0.750 1.000 1.64e-12 1.92e-11 ✓ sig. —
Familial polycythemia Polycythemia, primary familial and congenital
3 genes
Show details
3 of 3 corroborated by 2+ sources
SH2B3(2), EPOR(4), JAK2(2)
0.750 1.000 1.64e-12 1.92e-11 ✓ sig. —
Glucocorticoid deficiency with achalasia Triple a syndrome
3 genes
Show details
3 of 3 corroborated by 2+ sources
TRAPPC11(2), AAAS(4), GMPPA(2)
0.750 1.000 1.64e-12 1.92e-11 ✓ sig. Cluster 295 →
Benign mucous membrane pemphigoid Benign mucous membrane pemphigoid with ocular involvement
3 genes
Show details
1 of 3 corroborated by 2+ sources
HLA-DRB1(1), HLA-DQB1(1), PTGER3(2)
0.750 1.000 1.64e-12 1.92e-11 ✓ sig. Cluster 1 →
11p11.2 deletion syndrome Potocki-shaffer syndrome
3 genes
Show details
3 of 3 corroborated by 2+ sources
ALX4(2), EXT2(2), PHF21A(3)
0.750 1.000 1.64e-12 1.92e-11 ✓ sig. Cluster 93 →
3mc syndrome Malpuech facial clefting syndrome
3 genes
Show details
3 of 3 corroborated by 2+ sources
COLEC10(3), COLEC11(3), MASP1(4)
0.750 1.000 1.64e-12 1.92e-11 ✓ sig. Cluster 353 →
Afibrinogenemia Congenital afibrinogenemia
3 genes
Show details
3 of 3 corroborated by 2+ sources
FGA(3), FGG(3), FGB(3)
0.750 1.000 1.64e-12 1.92e-11 ✓ sig. Cluster 149 →
Afibrinogenemia Congenital fibrinogen deficiency
3 genes
Show details
3 of 3 corroborated by 2+ sources
FGA(4), FGG(4), FGB(4)
0.750 1.000 1.64e-12 1.92e-11 ✓ sig. Cluster 149 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.