Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Colobomatous optic disc macular atrophy chorioretinopathy syndrome Nanophthalmos
1 gene
Show details
1 of 1 corroborated by 2+ sources
SIX6(4)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. Cluster 56 →
Cone-rod synaptic disorder Congenital stationary night blindness
1 gene
Show details
1 of 1 corroborated by 2+ sources
CABP4(4)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Birk-barel syndrome Stomach disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
TRPM3(2)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. Cluster 109 →
Bmpr1a-related juvenile polyposis Ductal carcinoma of breast
1 gene
Show details
1 of 1 corroborated by 2+ sources
SMAD4(2)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Bombay phenotype Megaloblastic anemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
FUT2(3)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. Cluster 106 →
Bombay phenotype Vitamin b deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
FUT2(4)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. Cluster 106 →
Bone remodeling disease Breast fibrocystic disease
1 gene
Show details
CSMD1(1)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Brittle cornea syndrome Corneal disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
ZNF469(6)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Cardiofaciocutaneous syndrome Noonan syndrome-like disorder with loose anagen hair
1 gene
Show details
1 of 1 corroborated by 2+ sources
SHOC2(2)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. Cluster 42 →
Ovarian dysgenesis Ovarian hyperstimulation syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
FSHR(6)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. Cluster 38 →
Cataract-glaucoma syndrome Stomach disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
TRPM3(3)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. Cluster 109 →
Autoimmune pancreatitis Stomach disease
1 gene
Show details
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
17 alpha-hydroxyprogesterone aldolase deficiency Paranoia
1 gene
Show details
1 of 1 corroborated by 2+ sources
AKR1C4(2)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Alopecia-intellectual disability syndrome Hypotrichosis simplex
1 gene
Show details
1 of 1 corroborated by 2+ sources
LSS(3)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Amed syndrome Diabetes complications
1 gene
Show details
1 of 1 corroborated by 2+ sources
ALDH2(2)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Amish infantile epilepsy syndrome Latent autoimmune diabetes in adults
1 gene
Show details
1 of 1 corroborated by 2+ sources
ATXN2(2)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Anaplasia Diabetes complications
1 gene
Show details
1 of 1 corroborated by 2+ sources
HIF1A(2)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Anaptoglobinemia Diabetes complications
1 gene
Show details
1 of 1 corroborated by 2+ sources
HP(4)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Charcot-Marie-Tooth disease type 2 Congenital pes cavus
1 gene
Show details
1 of 1 corroborated by 2+ sources
NEFL(2)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. Cluster 15 →
Cholecystitis Keppen-lubinsky syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
KCNJ6(6)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Coats plus syndrome Lipoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
STN1(2)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Cobblestone lissencephaly Corneal disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
LAMB1(6)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. Cluster 222 →
Cobblestone lissencephaly Periventricular nodular heterotopia
1 gene
Show details
1 of 1 corroborated by 2+ sources
TMTC3(2)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Cerebrocostomandibular syndrome Mixed connective tissue disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
SNRPB(6)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. Cluster 12 →
Charcot-Marie-Tooth disease type 1A Myoclonic epilepsy
1 gene
Show details
1 of 1 corroborated by 2+ sources
PMP22(3)
0.040 1.000 1.56e-3 2.38e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.