Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
neurodegeneration with brain iron accumulation 4 Urinary system neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Atrioventricular septal defect NR2F2 related multiple congenital anomalies/dysmorphic syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
NR2F2(3)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Congenital stationary night blindness NYX-related retinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
NYX(3)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 151 →
obsolete Stüve-Wiedemann syndrome Paranoia
1 gene
Show details
1 of 1 corroborated by 2+ sources
LIFR(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Eye neoplasms oculocutaneous albinism type 1
1 gene
Show details
1 of 1 corroborated by 2+ sources
TYR(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Duane retraction syndrome Osteoma cutis
1 gene
Show details
GNAS(1)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Ovarian dysgenesis Ovarian teratoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
BMP15(6)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 38 →
2q37 microdeletion syndrome Diabetes complications
1 gene
Show details
1 of 1 corroborated by 2+ sources
HDAC4(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Acral self-healing collodion baby Congenital nonbullous ichthyosiform erythroderma
1 gene
Show details
1 of 1 corroborated by 2+ sources
TGM1(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 233 →
Aland island eye disease Congenital stationary night blindness
1 gene
Show details
1 of 1 corroborated by 2+ sources
CACNA1F(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Alanine-glyoxylate aminotransferase deficiency Hyperoxaluria
1 gene
Show details
1 of 1 corroborated by 2+ sources
AGXT(8)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 296 →
Alexander disease Trigeminal neuralgia
1 gene
Show details
1 of 1 corroborated by 2+ sources
GFAP(4)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Alstrom syndrome Fetal akinesia deformation sequence
1 gene
Show details
1 of 1 corroborated by 2+ sources
ALMS1(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 34 →
amyotrophic lateral sclerosis type 22 Frontotemporal dementia with or without amyotrophic lateral sclerosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
TUBA4A(3)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
amyotrophic lateral sclerosis, susceptibility to, 24 Majewski syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
NEK1(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 22 →
amyotrophic lateral sclerosis, susceptibility to, 25 Frontotemporal dementia with or without amyotrophic lateral sclerosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
KIF5A(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Kidney disease Nephronophthisis-like nephropathy
2 genes
Show details
2 of 2 corroborated by 2+ sources
XPNPEP3(6), SLC41A1(5)
0.005 1.000 7.60e-4 1.41e-3 ✓ sig. —
Giant cell arteritis Proliferative diabetic retinopathy
2 genes
Show details
1 of 2 corroborated by 2+ sources
CCL2(1), HLA-B(3)
0.038 0.111 7.94e-4 1.43e-3 ✓ sig. —
Amblyopia Leukodystrophy
2 genes
Show details
GALC(1), SLC9A6(1)
0.040 0.080 8.03e-4 1.45e-3 ✓ sig. —
12p12.1 microdeletion syndrome Vertebral column disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
SOX5(3)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
1p36 deletion syndrome Silverman-Handmaker type dyssegmental dysplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
HSPG2(3)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. Cluster 350 →
1p36 deletion syndrome radio-tartaglia syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SPEN(3)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. Cluster 350 →
2-methylbutyryl-coa dehydrogenase deficiency Rheumatic disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
ACADSB(5)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Abcd syndrome Waardenburg syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
EDNRB(7)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —
Acatalasia Optic neuritis
1 gene
Show details
1 of 1 corroborated by 2+ sources
CAT(3)
0.071 1.000 8.44e-4 1.50e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.