Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Postsynaptic congenital myasthenic syndrome Presynaptic congenital myasthenic syndrome
2 genes
Show details
2 of 2 corroborated by 2+ sources
AGRN(3), COL13A1(3)
0.091 0.182 3.05e-5 1.41e-4 ✓ sig. Cluster 34 →
Irritant dermatitis Systemic scleroderma
2 genes
Show details
2 of 2 corroborated by 2+ sources
0.087 0.222 3.18e-5 1.47e-4 ✓ sig. Cluster 25 →
Oral cavity carcinoma Respiratory system neoplasm
2 genes
Show details
HLA-DQB1(1), ADH1B(1)
0.063 0.400 3.18e-5 1.47e-4 ✓ sig. Cluster 1 →
Middle aortic syndrome Moyamoya angiopathy
2 genes
Show details
NF1(1), RNF213(1)
0.051 0.500 3.18e-5 1.47e-4 ✓ sig. Cluster 77 →
Huntington disease Pheochromocytoma
3 genes
Show details
3 of 3 corroborated by 2+ sources
MAOA(2), MAOB(2), GDNF(2)
0.040 0.188 3.19e-5 1.48e-4 ✓ sig. —
Gaucher disease Metachromatic leukodystrophy
2 genes
Show details
1 of 2 corroborated by 2+ sources
PSAP(7), CDH23(1)
0.083 0.250 3.20e-5 1.48e-4 ✓ sig. Cluster 118 →
Chondrodysplasia Duodenitis
2 genes
Show details
2 of 2 corroborated by 2+ sources
0.083 0.250 3.20e-5 1.48e-4 ✓ sig. —
Interstitial lung disease Systemic scleroderma
3 genes
Show details
1 of 3 corroborated by 2+ sources
RTEL1(2), HLA-DPB1(1), HLA-DPA1(1)
0.038 0.200 3.30e-5 1.52e-4 ✓ sig. —
Cirrhosis Liver failure
2 genes
Show details
2 of 2 corroborated by 2+ sources
KRT8(3), KRT18(4)
0.037 0.667 3.35e-5 1.55e-4 ✓ sig. —
Congenital diaphragmatic hernia Cryptophthalmos syndrome
2 genes
Show details
1 of 2 corroborated by 2+ sources
FRAS1(1), FREM2(2)
0.077 0.286 3.35e-5 1.55e-4 ✓ sig. —
Dextrocardia Situs inversus
2 genes
Show details
1 of 2 corroborated by 2+ sources
ZIC3(2), CFAP53(1)
0.077 0.286 3.35e-5 1.55e-4 ✓ sig. Cluster 46 →
Gallbladder disease Intrahepatic cholestasis of pregnancy
2 genes
Show details
2 of 2 corroborated by 2+ sources
ABCG8(4), ABCB4(5)
0.077 0.286 3.35e-5 1.55e-4 ✓ sig. —
Corneal edema Duodenal ulcer
2 genes
Show details
PRTFDC1(1), ARHGAP21(1)
0.050 0.500 3.36e-5 1.55e-4 ✓ sig. —
Brain aneurysm Peripheral vascular disease
4 genes
Show details
CARD11(1), HDAC9(1), LINGO2(1), EDNRA(1)
0.034 0.121 3.43e-5 1.58e-4 ✓ sig. —
Bronchial hyperreactivity Common migraine
2 genes
Show details
2 of 2 corroborated by 2+ sources
TAC1(2), CALCA(2)
0.087 0.200 3.44e-5 1.58e-4 ✓ sig. —
Congenital epicanthus Esotropia
2 genes
Show details
ANKRD11(1), TFAP2A(1)
0.087 0.200 3.44e-5 1.58e-4 ✓ sig. —
Brain edema Hepatic encephalopathy
2 genes
Show details
2 of 2 corroborated by 2+ sources
S100B(2), TNF(2)
0.087 0.200 3.44e-5 1.58e-4 ✓ sig. —
Childhood absence epilepsy Hepatic encephalopathy
2 genes
Show details
2 of 2 corroborated by 2+ sources
GABRG2(3), GABRA1(3)
0.087 0.200 3.44e-5 1.58e-4 ✓ sig. —
Benign infantile epilepsy Myoclonic epilepsy
2 genes
Show details
2 of 2 corroborated by 2+ sources
CHRNA2(2), KCNQ3(3)
0.069 0.333 3.48e-5 1.60e-4 ✓ sig. —
Congenital heart septal defect Double outlet right ventricle
2 genes
Show details
2 of 2 corroborated by 2+ sources
NKX2-5(2), YES1(2)
0.080 0.250 3.60e-5 1.66e-4 ✓ sig. —
Ruptured abdominal aortic aneurysm Thoracic aortic aneurysm
2 genes
Show details
2 of 2 corroborated by 2+ sources
FBN1(2), EFEMP2(2)
0.080 0.250 3.60e-5 1.66e-4 ✓ sig. Cluster 66 →
Ruptured aortic aneurysm Thoracic aortic aneurysm
2 genes
Show details
2 of 2 corroborated by 2+ sources
FBN1(2), EFEMP2(2)
0.080 0.250 3.60e-5 1.66e-4 ✓ sig. Cluster 66 →
Ruptured thoracic aortic aneurysm Thoracic aortic aneurysm
2 genes
Show details
2 of 2 corroborated by 2+ sources
FBN1(2), EFEMP2(2)
0.080 0.250 3.60e-5 1.66e-4 ✓ sig. Cluster 66 →
Thoracic aortic aneurysm Thoracoabdominal aortic aneurysm
2 genes
Show details
2 of 2 corroborated by 2+ sources
FBN1(2), EFEMP2(2)
0.080 0.250 3.60e-5 1.66e-4 ✓ sig. Cluster 66 →
Dyslipidemias Osteosclerosis
2 genes
Show details
2 of 2 corroborated by 2+ sources
TNFRSF11A(3), TCIRG1(4)
0.080 0.250 3.60e-5 1.66e-4 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.