Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Follicular thyroid cancer Schimmelpenning-feuerstein-mims syndrome
2 genes
Show details
2 of 2 corroborated by 2+ sources
NRAS(2), HRAS(2)
0.222 0.667 5.31e-7 3.27e-6 ✓ sig. Cluster 18 →
Gallbladder disease Sitosterolemia
2 genes
Show details
2 of 2 corroborated by 2+ sources
ABCG8(7), ABCG5(7)
0.222 0.667 5.31e-7 3.27e-6 ✓ sig. —
Ferroxidase deficiency Iron overload
2 genes
Show details
2 of 2 corroborated by 2+ sources
CP(3), SLC40A1(2)
0.222 0.667 5.31e-7 3.27e-6 ✓ sig. Cluster 231 →
Capillary malformation Klippel-trenaunay syndrome
2 genes
Show details
1 of 2 corroborated by 2+ sources
GNAQ(1), PIK3CA(2)
0.222 0.667 5.31e-7 3.27e-6 ✓ sig. Cluster 40 →
Brain neoplasms Rhabdomyosarcoma
4 genes
Show details
1 of 4 corroborated by 2+ sources
VEGFA(1), YAP1(1), PTCH1(1), HRAS(2)
0.065 0.148 5.31e-7 3.27e-6 ✓ sig. —
Hematuria Hemorrhage
3 genes
Show details
3 of 3 corroborated by 2+ sources
PLAU(2), POMC(2), F7(2)
0.091 0.273 5.44e-7 3.35e-6 ✓ sig. —
B-cell chronic lymphocytic leukemia Lymphocytic b-cell leukemia
3 genes
Show details
3 of 3 corroborated by 2+ sources
TP53(2), ATM(2), P2RX7(2)
0.075 0.375 5.47e-7 3.36e-6 ✓ sig. —
Nasopharyngeal carcinoma Papilloma
3 genes
Show details
SOD2(1), ERBB2(1), CCND1(1)
0.094 0.250 5.52e-7 3.40e-6 ✓ sig. —
Febrile convulsion Lennox-gastaut syndrome
3 genes
Show details
2 of 3 corroborated by 2+ sources
GABRG2(5), SCN1A(3), SCN2A(1)
0.094 0.250 5.52e-7 3.40e-6 ✓ sig. Cluster 47 →
Microphthalmia with retinitis pigmentosa and ocular anomalies Nanophthalmos
2 genes
Show details
1 of 2 corroborated by 2+ sources
MFRP(6), C1QTNF5(1)
0.154 1.000 5.57e-7 3.41e-6 ✓ sig. Cluster 56 →
Congenital short bowel syndrome Intestinal obstruction
2 genes
Show details
2 of 2 corroborated by 2+ sources
FLNA(4), CLMP(5)
0.154 1.000 5.57e-7 3.41e-6 ✓ sig. —
Cholesterol embolism Thromboembolism
2 genes
Show details
2 of 2 corroborated by 2+ sources
PLAU(2), PLAT(2)
0.154 1.000 5.57e-7 3.41e-6 ✓ sig. —
Megaloblastic anemia Transcobalamin deficiency
2 genes
Show details
2 of 2 corroborated by 2+ sources
TCN2(7), TCN1(3)
0.154 1.000 5.57e-7 3.41e-6 ✓ sig. Cluster 106 →
Transcobalamin deficiency Vitamin b deficiency
2 genes
Show details
2 of 2 corroborated by 2+ sources
TCN2(7), TCN1(2)
0.154 1.000 5.57e-7 3.41e-6 ✓ sig. Cluster 106 →
Congenital hereditary endothelial dystrophy Hereditary corneal dystrophy
2 genes
Show details
2 of 2 corroborated by 2+ sources
OVOL2(2), SLC4A11(4)
0.154 1.000 5.57e-7 3.41e-6 ✓ sig. Cluster 75 →
Cerebrofacioarticular syndrome Periventricular nodular heterotopia
2 genes
Show details
2 of 2 corroborated by 2+ sources
FAT4(3), DCHS1(3)
0.154 1.000 5.57e-7 3.41e-6 ✓ sig. —
Coenzyme q10 deficiency Primary coenzyme q10 deficiency
2 genes
Show details
2 of 2 corroborated by 2+ sources
COQ6(5), COQ7(5)
0.154 1.000 5.57e-7 3.41e-6 ✓ sig. —
Anhidrotic ectodermal dysplasia with immunodeficiency, osteopetrosis, and lymphedema Congenital nonspherocytic hemolytic anemia
2 genes
Show details
2 of 2 corroborated by 2+ sources
G6PD(6), IKBKG(2)
0.154 1.000 5.57e-7 3.41e-6 ✓ sig. Cluster 87 →
Autoinflammatory disease, systemic, x-linked Congenital nonspherocytic hemolytic anemia
2 genes
Show details
2 of 2 corroborated by 2+ sources
G6PD(6), IKBKG(3)
0.154 1.000 5.57e-7 3.41e-6 ✓ sig. Cluster 87 →
Bloch sulzberger syndrome Congenital nonspherocytic hemolytic anemia
2 genes
Show details
1 of 2 corroborated by 2+ sources
G6PD(6), IKBKG(1)
0.154 1.000 5.57e-7 3.41e-6 ✓ sig. Cluster 87 →
Congenital structural myopathy X-linked centronuclear myopathy
2 genes
Show details
1 of 2 corroborated by 2+ sources
MTM1(2), DNM2(1)
0.154 1.000 5.57e-7 3.41e-6 ✓ sig. —
Curry-hall syndrome Majewski syndrome
2 genes
Show details
2 of 2 corroborated by 2+ sources
EVC(2), EVC2(2)
0.154 1.000 5.57e-7 3.41e-6 ✓ sig. —
Camos syndrome Galloway-mowat syndrome
2 genes
Show details
2 of 2 corroborated by 2+ sources
ZNF592(2), WDR73(8)
0.154 1.000 5.57e-7 3.41e-6 ✓ sig. Cluster 30 →
Periventricular nodular heterotopia Van maldergem syndrome
2 genes
Show details
2 of 2 corroborated by 2+ sources
FAT4(5), DCHS1(6)
0.154 1.000 5.57e-7 3.41e-6 ✓ sig. —
Atrioventricular septal defect Pancreatic hypoplasia-diabetes-congenital heart disease syndrome
2 genes
Show details
2 of 2 corroborated by 2+ sources
GATA4(6), GATA6(6)
0.154 1.000 5.57e-7 3.41e-6 ✓ sig. Cluster 60 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.