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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
mucopolysaccharidosis type 4B Spondyloepiphyseal dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
GLB1(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Aortic dissection multiple self-healing squamous epithelioma
1 gene
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1 of 1 corroborated by 2+ sources
TGFBR1(3)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
multiple self-healing squamous epithelioma Uremia
1 gene
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1 of 1 corroborated by 2+ sources
TGFBR1(3)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Dyslipidemias H syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SLC29A3(4)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Hearing loss with hypertrophic cardiomyopathy Junctional epidermolysis bullosa
1 gene
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MYO6(1)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Developmental regression Hepatoencephalopathy due to combined oxidative phosphorylation defect
1 gene
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1 of 1 corroborated by 2+ sources
GFM1(4)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. Cluster 323 →
Chorea hsd10 mitochondrial disease
1 gene
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1 of 1 corroborated by 2+ sources
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. Cluster 1 →
Dyslipidemias hypercholesterolemia, familial, 1
1 gene
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1 of 1 corroborated by 2+ sources
LDLR(3)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
hypoinsulinemic hypoglycemia and body hemihypertrophy Lipodystrophy
1 gene
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1 of 1 corroborated by 2+ sources
AKT2(3)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Carcinogenesis hypoparathyroidism-deafness-renal disease syndrome
1 gene
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1 of 1 corroborated by 2+ sources
GATA3(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Developmental regression hypotonia, ataxia, and delayed development syndrome
1 gene
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1 of 1 corroborated by 2+ sources
EBF3(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. Cluster 323 →
Hemangiosarcoma immune dysregulation, autoimmunity, and autoinflammation
1 gene
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1 of 1 corroborated by 2+ sources
PLCG1(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. Cluster 3 →
Clinodactyly Intellectual developmental disorder cataracts myopathy
1 gene
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1 of 1 corroborated by 2+ sources
ZBTB20(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Chorea Intellectual developmental disorder seizures movement
1 gene
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1 of 1 corroborated by 2+ sources
PDE2A(4)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. Cluster 1 →
Developmental regression intellectual disability, autosomal dominant 42
1 gene
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1 of 1 corroborated by 2+ sources
GNB1(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Interstitial systitis Potassium deficiency
1 gene
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ADRB2(1)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Gross motor development delay Iodide peroxidase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
TPO(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
keutel syndrome Spondyloepiphyseal dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
MGP(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
keutel syndrome Uremia
1 gene
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1 of 1 corroborated by 2+ sources
MGP(3)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Developmental regression krabbe disease
1 gene
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1 of 1 corroborated by 2+ sources
GALC(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Lafora body disease Potassium deficiency
1 gene
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1 of 1 corroborated by 2+ sources
PRDM8(3)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Junctional epidermolysis bullosa Laryngo-onycho-cutaneous syndrome
1 gene
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1 of 1 corroborated by 2+ sources
LAMA3(7)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Henoch schoenlein purpura Thiopurine immunosuppressant-induced pancreatitis
1 gene
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0.053 1.000 1.17e-3 1.90e-3 ✓ sig. Cluster 1 →
Graves ophthalmopathy Thrombasthenia-thrombocytopenia
1 gene
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1 of 1 corroborated by 2+ sources
GFI1B(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —
Clinodactyly thrombocytopenia-absent radius syndrome
1 gene
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1 of 1 corroborated by 2+ sources
RBM8A(2)
0.053 1.000 1.17e-3 1.90e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.