Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Corneal disease White spongue nevus
1 gene
Show details
1 of 1 corroborated by 2+ sources
KRT4(5)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. Cluster 222 →
Congenital structural myopathy X-linked myotubular myopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
MTM1(4)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Congenital pes cavus X-linked progressive cerebellar ataxia
1 gene
Show details
1 of 1 corroborated by 2+ sources
GJB1(3)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Paranoia Parapsoriasis
1 gene
Show details
1 of 1 corroborated by 2+ sources
HLA-A(2)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Paralysis Parkinson-dementia complex of guam
1 gene
Show details
1 of 1 corroborated by 2+ sources
TRPM7(2)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Periapical periodontitis Tonic-clonic epilepsy
1 gene
Show details
1 of 1 corroborated by 2+ sources
FGF2(2)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. Cluster 330 →
Neonatal diabetes mellitus with congenital hypothyroidism Periprosthetic osteolysis
1 gene
Show details
1 of 1 corroborated by 2+ sources
GLIS3(6)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. Cluster 394 →
Duane retraction syndrome Primary adrenal insufficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
CUX1(2)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Paranoia Primary cutaneous anaplastic large cell lymphoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
TYK2(3)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Congenital nonspherocytic hemolytic anemia Pyruvate kinase deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
PKLR(2)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Diabetes complications qualitative platelet defect
1 gene
Show details
1 of 1 corroborated by 2+ sources
ABCC4(3)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Congenital sodium diarrhea Intestinal obstruction
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC9A3(3)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. Cluster 172 →
Corneal disease ehlers-danlos syndrome, classic type
1 gene
Show details
1 of 1 corroborated by 2+ sources
COL5A1(2)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Corneal endothelial dystrophy Hereditary corneal dystrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC4A11(3)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. Cluster 75 →
Corneal disease Corneal endothelial dystrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
KRT3(2)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Demyelinating hereditary motor and sensory neuropathy Rothmund-thomson syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
FBLN5(3)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. Cluster 80 →
autosomal dominant medullary cystic kidney disease with or without hyperuricemia Hydronephrosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
UMOD(2)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Bilateral generalized polymicrogyria Trigeminal neuralgia
1 gene
Show details
1 of 1 corroborated by 2+ sources
GRIN1(3)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Birk-barel syndrome Stomach disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
TRPM3(2)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. Cluster 109 →
Bmpr1a-related juvenile polyposis Ductal carcinoma of breast
1 gene
Show details
1 of 1 corroborated by 2+ sources
SMAD4(2)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Bombay phenotype Megaloblastic anemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
FUT2(3)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. Cluster 106 →
Bombay phenotype Vitamin b deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
FUT2(4)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. Cluster 106 →
Bone remodeling disease Breast fibrocystic disease
1 gene
Show details
CSMD1(1)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
Brittle cornea syndrome Corneal disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
ZNF469(6)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —
17 alpha-hydroxyprogesterone aldolase deficiency Paranoia
1 gene
Show details
1 of 1 corroborated by 2+ sources
AKR1C4(2)
0.071 0.500 1.56e-3 2.38e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.