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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Arrhythmogenic right ventricular cardiomyopathy Atrial tachyarrhythmia, infra-hisian cardiac conduction disease
1 gene
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TNNI3K(1)
0.019 1.000 3.38e-3 4.37e-3 ✓ sig. Cluster 4 →
autoimmune lymphoproliferative syndrome type 1 Liver failure
1 gene
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1 of 1 corroborated by 2+ sources
FASLG(3)
0.019 1.000 3.38e-3 4.37e-3 ✓ sig. Cluster 368 →
Immune dysregulation-inflammatory bowel disease-arthritis-recurrent infection-lymphopenia syndrome Osteonecrosis of the femoral head
1 gene
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1 of 1 corroborated by 2+ sources
RIPK1(3)
0.019 1.000 3.38e-3 4.37e-3 ✓ sig. —
immunodeficiency 57 Osteonecrosis of the femoral head
1 gene
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1 of 1 corroborated by 2+ sources
RIPK1(2)
0.019 1.000 3.38e-3 4.37e-3 ✓ sig. —
Arrhythmogenic right ventricular cardiomyopathy intrinsic cardiomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
PLN(3)
0.019 1.000 3.38e-3 4.37e-3 ✓ sig. Cluster 4 →
Arrhythmogenic right ventricular cardiomyopathy familial isolated arrhythmogenic right ventricular dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
DSC2(6)
0.019 1.000 3.38e-3 4.37e-3 ✓ sig. Cluster 4 →
fructose-1,6-bisphosphatase deficiency Liver failure
1 gene
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1 of 1 corroborated by 2+ sources
FBP1(3)
0.019 1.000 3.38e-3 4.37e-3 ✓ sig. —
gaze palsy, familial horizontal, with progressive scoliosis 1 Retinopathy
1 gene
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1 of 1 corroborated by 2+ sources
ROBO3(2)
0.019 1.000 3.38e-3 4.37e-3 ✓ sig. —
Genetic renal tubular disease Vascular disease
1 gene
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1 of 1 corroborated by 2+ sources
SLC12A3(2)
0.019 1.000 3.38e-3 4.37e-3 ✓ sig. —
Childhood-onset benign chorea with striatal involvement Conduct disorder
1 gene
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1 of 1 corroborated by 2+ sources
PDE10A(3)
0.019 1.000 3.38e-3 4.37e-3 ✓ sig. —
Corpus callosum agenesis with facial anomalies and cerebellar ataxia Osteonecrosis of the femoral head
1 gene
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1 of 1 corroborated by 2+ sources
FRMD4A(3)
0.019 1.000 3.38e-3 4.37e-3 ✓ sig. —
Corpus callosum agenesis with facial anomalies and cerebellar ataxia Vascular disease
1 gene
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1 of 1 corroborated by 2+ sources
FRMD4A(3)
0.019 1.000 3.38e-3 4.37e-3 ✓ sig. —
Cria syndrome Osteonecrosis of the femoral head
1 gene
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1 of 1 corroborated by 2+ sources
RIPK1(2)
0.019 1.000 3.38e-3 4.37e-3 ✓ sig. —
Arrhythmogenic right ventricular cardiomyopathy lissencephaly 10
1 gene
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1 of 1 corroborated by 2+ sources
CEP85L(2)
0.019 1.000 3.38e-3 4.37e-3 ✓ sig. Cluster 4 →
Arrhythmogenic right ventricular cardiomyopathy long qt syndrome 5
1 gene
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1 of 1 corroborated by 2+ sources
KCNE1(2)
0.019 1.000 3.38e-3 4.37e-3 ✓ sig. —
Liver failure medium chain acyl-coa dehydrogenase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
ACADM(3)
0.019 1.000 3.38e-3 4.37e-3 ✓ sig. —
Mowat-wilson syndrome Pena-shokeir syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ZEB2(7)
0.019 1.000 3.38e-3 4.37e-3 ✓ sig. —
ADAM9-related retinopathy Retinopathy
1 gene
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1 of 1 corroborated by 2+ sources
ADAM9(2)
0.019 1.000 3.38e-3 4.37e-3 ✓ sig. Cluster 187 →
AIPL1-related retinopathy Retinopathy
1 gene
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1 of 1 corroborated by 2+ sources
AIPL1(2)
0.019 1.000 3.38e-3 4.37e-3 ✓ sig. —
Alpha-n-acetylgalactosaminidase deficiency Pena-shokeir syndrome
1 gene
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1 of 1 corroborated by 2+ sources
NAGA(4)
0.019 1.000 3.38e-3 4.37e-3 ✓ sig. —
Aminoglycoside-induced deafness Liver failure
1 gene
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1 of 1 corroborated by 2+ sources
TRMU(4)
0.019 1.000 3.38e-3 4.37e-3 ✓ sig. —
Apolipoprotein c-ii deficiency Liver failure
1 gene
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1 of 1 corroborated by 2+ sources
APOC2(6)
0.019 1.000 3.38e-3 4.37e-3 ✓ sig. —
Dihydropteridine reductase deficiency Liver failure
1 gene
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1 of 1 corroborated by 2+ sources
QDPR(5)
0.019 1.000 3.38e-3 4.37e-3 ✓ sig. Cluster 368 →
Arrhythmogenic right ventricular cardiomyopathy dilated cardiomyopathy 1CC
1 gene
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1 of 1 corroborated by 2+ sources
NEXN(2)
0.019 1.000 3.38e-3 4.37e-3 ✓ sig. Cluster 4 →
Arrhythmogenic right ventricular cardiomyopathy dilated cardiomyopathy 1FF
1 gene
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1 of 1 corroborated by 2+ sources
TNNI3(2)
0.019 1.000 3.38e-3 4.37e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.