Gene Gene information from NCBI Gene database.
Entrez ID 34
Gene name Acyl-CoA dehydrogenase medium chain
Gene symbol ACADM
Synonyms (NCBI Gene)
ACAD1MCADMCADH
Chromosome 1
Chromosome location 1p31.1
Summary This gene encodes the medium-chain specific (C4 to C12 straight chain) acyl-Coenzyme A dehydrogenase. The homotetramer enzyme catalyzes the initial step of the mitochondrial fatty acid beta-oxidation pathway. Defects in this gene cause medium-chain acyl-C
SNPs SNP information provided by dbSNP.
118
SNP ID Visualize variation Clinical significance Consequence
rs74090726 A>C Benign, benign-likely-benign, risk-factor Synonymous variant, coding sequence variant, intron variant
rs77931234 A>C,G Conflicting-interpretations-of-pathogenicity, pathogenic Missense variant, coding sequence variant
rs113887538 G>A,T Likely-pathogenic Intron variant, splice donor variant
rs121434274 G>A Pathogenic-likely-pathogenic, pathogenic Missense variant, coding sequence variant
rs121434275 T>C Pathogenic Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
70
miRTarBase ID miRNA Experiments Reference
MIRT004953 hsa-miR-98-5p qRT-PCR 17942906
MIRT021871 hsa-miR-128-3p Microarray 17612493
MIRT028946 hsa-miR-26b-5p Microarray 19088304
MIRT755551 hsa-miR-16-2-3p Luciferase reporter assayWestern blottingqRT-PCR 38336726
MIRT761447 hsa-miR-106a CLIP-seq
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
47
GO ID Ontology Definition Evidence Reference
GO:0001889 Process Liver development IEA
GO:0003995 Function Acyl-CoA dehydrogenase activity IDA 19224950
GO:0003995 Function Acyl-CoA dehydrogenase activity IEA
GO:0003995 Function Acyl-CoA dehydrogenase activity IMP 2393404
GO:0005634 Component Nucleus HDA 21630459
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
607008 89 ENSG00000117054
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
P11310
Protein name Medium-chain specific acyl-CoA dehydrogenase, mitochondrial (MCAD) (EC 1.3.8.7) (Medium chain acyl-CoA dehydrogenase) (MCADH)
Protein function Medium-chain specific acyl-CoA dehydrogenase is one of the acyl-CoA dehydrogenases that catalyze the first step of mitochondrial fatty acid beta-oxidation, an aerobic process breaking down fatty acids into acetyl-CoA and allowing the production
PDB 1EGC , 1EGD , 1EGE , 1T9G , 2A1T , 4P13 , 8SGP
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF02771 Acyl-CoA_dh_N 42 152 Acyl-CoA dehydrogenase, N-terminal domain Domain
PF02770 Acyl-CoA_dh_M 157 255 Acyl-CoA dehydrogenase, middle domain Domain
PF00441 Acyl-CoA_dh_1 267 416 Acyl-CoA dehydrogenase, C-terminal domain Domain
Sequence
Sequence length 421
Interactions View interactions
Associated diseases Disease associations from ClinVar (causal & non-causal) and other databases (OMIM, Orphanet, GWAS, etc.).
18
Evidence Score: ★☆☆☆☆  Gene-disease association found in Text Mining only ★★☆☆☆  Found in Text Mining and Unknown/Other Associations ★★★☆☆  Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆  ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★  ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession Evidence Score
ACADM-related disorder Likely pathogenic; Pathogenic rs77931234, rs1225471006, rs121434274, rs121434277, rs387906297, rs121434283, rs201375579, rs766140986, rs866388216, rs370523609, rs757434857, rs2525698694, rs1057516485 RCV003430631
RCV003914801
RCV003415641
RCV003398435
RCV003924798
View all (8 more)
★★★★★
ClinVar: Pathogenic / Likely Pathogenic (≥5 Variants)
Deficiency of butyryl-CoA dehydrogenase Likely pathogenic; Pathogenic rs121434274 RCV005644472
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Epileptic spasm Likely pathogenic; Pathogenic rs77931234, rs201375579 RCV001526621
RCV001526622
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Glioma susceptibility 1 Pathogenic rs2525609308 RCV005934656
★★★★☆
ClinVar: Pathogenic / Likely Pathogenic (<5 Variants)
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
Phenotype Name Clinical Significance Source Evidence Score
ENTEROCOLITIS, NECROTIZING CTD
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Gastric cancer - ClinVar
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
HYDROCEPHALUS, CONGENITAL, 2, WITH OR WITHOUT BRAIN OR EYE ANOMALIES Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
LIVER FAILURE CTD, Disgenet
CTD, Disgenet
★★☆☆☆
Found in Text Mining + Unknown/Other Associations
Associations from Text Mining Disease associations identified through text mining
Disease Name Disease (Merged) Source PMID Relationship Type Evidence Score
Arthritis, Psoriatic Psoriatic Arthritis BEFREE 31744213
★☆☆☆☆
Found in Text Mining only
Attention Deficit Disorder with Hyperactivity Attention deficit hyperactivity disorder Pubtator 11263545 Associate
★☆☆☆☆
Found in Text Mining only
Breast Carcinoma Breast Carcinoma BEFREE 28974683
★☆☆☆☆
Found in Text Mining only
Carcinoma Renal Cell Renal cell carcinoma Pubtator 33221754, 34528699, 37460577 Associate
★☆☆☆☆
Found in Text Mining only
Cerebral Palsy Cerebral palsy Pubtator 35076175 Associate
★☆☆☆☆
Found in Text Mining only
Colitis Ulcerative Ulcerative colitis Pubtator 38103512 Associate
★☆☆☆☆
Found in Text Mining only
Colorectal Carcinoma Colorectal Cancer BEFREE 28977850
★☆☆☆☆
Found in Text Mining only
Congestive heart failure Congestive Heart Failure BEFREE 29301869, 8941110, 9852194
★☆☆☆☆
Found in Text Mining only
Conventional (Clear Cell) Renal Cell Carcinoma Renal Carcinoma BEFREE 31788359
★☆☆☆☆
Found in Text Mining only
Crisponi syndrome Crisponi syndrome Pubtator 26329309 Associate
★☆☆☆☆
Found in Text Mining only