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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Diabetes mellitus type 2 Neurodevelopmental disorder with cerebellar hypoplasia and spasticity
1 gene
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1 of 1 corroborated by 2+ sources
INTS8(2)
0.000 1.000 1.99e-1 1.99e-1 —
Diabetes mellitus type 2 Neurodevelopmental disorder with speech and motor delay and spasticity
1 gene
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1 of 1 corroborated by 2+ sources
RAB1A(2)
0.000 1.000 1.99e-1 1.99e-1 —
Neurodevelopmental disorder with progressive microcephaly, spasticity, and brain anomalies Schizophrenia
1 gene
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1 of 1 corroborated by 2+ sources
PLAA(3)
0.000 1.000 1.64e-1 1.64e-1 —
Neurodevelopmental disorder with intracranial hemorrhage, seizures, and spasticity Schizophrenia
1 gene
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1 of 1 corroborated by 2+ sources
ESAM(4)
0.000 1.000 1.64e-1 1.64e-1 —
Alzheimer disease Neurodevelopmental disorder with spasticity and poor growth
1 gene
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1 of 1 corroborated by 2+ sources
UFC1(2)
0.000 1.000 1.43e-1 1.44e-1 —
Alzheimer disease Neurodevelopmental disorder with speech and motor delay and spasticity
1 gene
Show details
1 of 1 corroborated by 2+ sources
RAB1A(2)
0.000 1.000 1.43e-1 1.44e-1 —
Autism Neurodevelopmental disorder with microcephaly, cortical malformations, and spasticity
1 gene
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1 of 1 corroborated by 2+ sources
TMX2(2)
0.001 1.000 9.50e-2 9.59e-2 —
Breast cancer Complex neurodevelopmental disorder with spasticity and hypoplasia of corpus callosum
1 gene
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1 of 1 corroborated by 2+ sources
RPS6KC1(2)
0.001 1.000 8.11e-2 8.21e-2 —
Obesity Spasticity with hyperglycinemia
1 gene
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1 of 1 corroborated by 2+ sources
GLRX5(4)
0.001 1.000 7.75e-2 7.86e-2 —
Neurodevelopmental disorder Neurodevelopmental disorder with spasticity and poor growth
1 gene
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1 of 1 corroborated by 2+ sources
UFC1(5)
0.001 1.000 6.50e-2 6.62e-2 —
Neurodevelopmental disorder Neurodevelopmental disorder with cerebellar hypoplasia and spasticity
1 gene
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1 of 1 corroborated by 2+ sources
INTS8(5)
0.001 1.000 6.50e-2 6.62e-2 —
Neurodevelopmental disorder Neurodevelopmental disorder with spasticity, seizures, and brain abnormalities
1 gene
Show details
1 of 1 corroborated by 2+ sources
NSRP1(6)
0.001 1.000 6.50e-2 6.62e-2 —
Neurodevelopmental disorder Neurodevelopmental disorder with speech and motor delay and spasticity
1 gene
Show details
1 of 1 corroborated by 2+ sources
RAB1A(2)
0.001 1.000 6.50e-2 6.62e-2 Cluster 3 →
Neurodevelopmental disorder Neurodevelopmental disorder with epilepsy, spasticity, and brain atrophy
1 gene
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1 of 1 corroborated by 2+ sources
TRAPPC4(6)
0.001 1.000 6.50e-2 6.62e-2 Cluster 3 →
Neurodevelopmental disorder Neurodevelopmental disorder with intracranial hemorrhage, seizures, and spasticity
1 gene
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1 of 1 corroborated by 2+ sources
ESAM(5)
0.001 1.000 6.50e-2 6.62e-2 Cluster 3 →
Neurodevelopmental disorder Neurodevelopmental disorder with severe-profound intellectual disability, spasticity and ectodermal features
1 gene
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1 of 1 corroborated by 2+ sources
GTPBP1(4)
0.001 1.000 6.50e-2 6.62e-2 —
Neurodevelopmental disorder Neurodevelopmental disorder with microcephaly, cortical malformations, and spasticity
1 gene
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1 of 1 corroborated by 2+ sources
TMX2(5)
0.001 1.000 6.50e-2 6.62e-2 —
Complex neurodevelopmental disorder with spasticity and hypoplasia of corpus callosum Neurodevelopmental disorder
1 gene
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RPS6KC1(1)
0.001 1.000 6.50e-2 6.62e-2 —
Neurodevelopmental disorder Neurodevelopmental disorder with progressive microcephaly, spasticity, and brain anomalies
1 gene
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1 of 1 corroborated by 2+ sources
PLAA(4)
0.001 1.000 6.50e-2 6.62e-2 —
Atrial fibrillation Neurodevelopmental disorder with speech and motor delay and spasticity
1 gene
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1 of 1 corroborated by 2+ sources
RAB1A(2)
0.001 1.000 5.57e-2 5.72e-2 —
Hypomyelination with brain stem and spinal cord involvement and leg spasticity Systemic lupus erythematosus
1 gene
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1 of 1 corroborated by 2+ sources
DARS1(2)
0.002 1.000 4.24e-2 4.40e-2 ✓ sig. Cluster 101 →
Leukoencephalopathy, motor delay, spasticity, and dysarthria syndrome Oligodendroglioma
1 gene
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1 of 1 corroborated by 2+ sources
EIF2AK1(2)
0.002 1.000 4.09e-2 4.25e-2 ✓ sig. —
Myocardial infarction Neurodevelopmental disorder with cerebellar hypoplasia and spasticity
1 gene
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1 of 1 corroborated by 2+ sources
INTS8(2)
0.002 1.000 3.74e-2 3.89e-2 ✓ sig. Cluster 8 →
Neurodevelopmental disorder with spasticity, seizures, and brain abnormalities Obstructive pulmonary disease
1 gene
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1 of 1 corroborated by 2+ sources
NSRP1(3)
0.002 1.000 3.61e-2 3.78e-2 ✓ sig. —
Neurodevelopmental disorder, nonprogressive, with spasticity and transient opisthotonus Parkinson disease
1 gene
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1 of 1 corroborated by 2+ sources
TNR(3)
0.002 1.000 3.41e-2 3.57e-2 ✓ sig. —

Showing 25 of 166 matching pairs, sorted by significance (descending). Click a column header to sort.