Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Alzheimer disease Neurodevelopmental delay, congenital heart defects, and distinct facial dysmorphism
1 gene
Show details
1 of 1 corroborated by 2+ sources
TMEM94(2)
0.000 1.000 1.43e-1 1.44e-1 —
Macrocephaly, neurodevelopmental delay, and seizures Neurodevelopmental disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
KPTN(3)
0.001 1.000 6.50e-2 6.62e-2 Cluster 3 →
Intellectual developmental disorder Macrocephaly, neurodevelopmental delay, and seizures
1 gene
Show details
1 of 1 corroborated by 2+ sources
KPTN(4)
0.001 1.000 5.26e-2 5.42e-2 Cluster 3 →
Dementia Neurodevelopmental delay, congenital heart defects, and distinct facial dysmorphism
1 gene
Show details
1 of 1 corroborated by 2+ sources
TMEM94(2)
0.002 1.000 3.82e-2 3.98e-2 ✓ sig. —
Brachydactyly and mild neurodevelopmental delay Neurotic disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
ERI1(2)
0.002 1.000 2.81e-2 2.96e-2 ✓ sig. —
Brachydactyly and mild neurodevelopmental delay Intellectual disability
1 gene
Show details
ERI1(1)
0.002 1.000 2.67e-2 2.82e-2 ✓ sig. —
Neurodevelopmental delay, congenital heart defects, and distinct facial dysmorphism Post-traumatic stress disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
TMEM94(2)
0.005 1.000 1.31e-2 1.44e-2 ✓ sig. —
Complex neurodevelopmental disorder Macrocephaly, neurodevelopmental delay, and seizures
1 gene
Show details
1 of 1 corroborated by 2+ sources
KPTN(2)
0.007 1.000 8.65e-3 9.79e-3 ✓ sig. Cluster 3 →
Severe neurodevelopmental delay Spastic paraplegia
1 gene
Show details
1 of 1 corroborated by 2+ sources
FICD(4)
0.008 1.000 8.01e-3 9.13e-3 ✓ sig. —
Congenital neurologic anomalies Neurodevelopmental delay, congenital heart defects, and distinct facial dysmorphism
1 gene
Show details
1 of 1 corroborated by 2+ sources
TMEM94(2)
0.009 1.000 7.43e-3 8.57e-3 ✓ sig. —
Developmental delay Macrocephaly, neurodevelopmental delay, and seizures
1 gene
Show details
KPTN(1)
0.013 1.000 5.04e-3 6.03e-3 ✓ sig. Cluster 3 →
Craniosynostosis Macrocephaly, neurodevelopmental delay, and seizures
1 gene
Show details
KPTN(1)
0.014 1.000 4.52e-3 5.48e-3 ✓ sig. —
Macrocephaly, neurodevelopmental delay, lymphoid hyperplasia, and persistent fetal hemoglobin Pharyngeal disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
ZBTB7A(2)
0.031 1.000 2.00e-3 2.72e-3 ✓ sig. —
Brachydactyly and mild neurodevelopmental delay Spondyloepimetaphyseal dysplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
ERI1(4)
0.038 1.000 1.61e-3 2.26e-3 ✓ sig. —
Erythematosquamous dermatosis Macrocephaly, neurodevelopmental delay, lymphoid hyperplasia, and persistent fetal hemoglobin
1 gene
Show details
1 of 1 corroborated by 2+ sources
ZBTB7A(2)
0.043 1.000 1.42e-3 2.04e-3 ✓ sig. —
Macrocephaly, neurodevelopmental delay, lymphoid hyperplasia, and persistent fetal hemoglobin Upper respiratory tract disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
ZBTB7A(2)
0.048 1.000 1.29e-3 1.89e-3 ✓ sig. —
Neonatal diabetes mellitus Severe neurodevelopmental delay
1 gene
Show details
FICD(1)
0.050 1.000 1.23e-3 1.81e-3 ✓ sig. —
Abnormal brain morphology Neurodevelopmental delay
1 gene
Show details
WDR91(1)
0.125 0.500 7.75e-4 1.25e-3 ✓ sig. —
Congenital progressive bone marrow failure-b-cell immunodeficiency-skeletal dysplasia syndrome Neurodevelopmental delay
1 gene
Show details
1 of 1 corroborated by 2+ sources
MYSM1(3)
0.143 1.000 3.87e-4 7.33e-4 ✓ sig. —
Mysm1 deficiency Neurodevelopmental delay
1 gene
Show details
MYSM1(1)
0.143 1.000 3.87e-4 7.33e-4 ✓ sig. —
Hygroma Neurodevelopmental delay
1 gene
Show details
WDR91(1)
0.143 1.000 3.87e-4 7.33e-4 ✓ sig. —
Basilicata-akhtar syndrome Neurodevelopmental delay
1 gene
Show details
1 of 1 corroborated by 2+ sources
MSL3(2)
0.143 1.000 3.87e-4 7.33e-4 ✓ sig. —
Neurodevelopmental delay Retinal dystrophy, juvenile cataracts, and short stature syndrome
1 gene
Show details
RDH11(1)
0.143 1.000 3.87e-4 7.33e-4 ✓ sig. —
Gingival overgrowth Neurodevelopmental delay
1 gene
Show details
KCNK4(1)
0.143 1.000 3.87e-4 7.33e-4 ✓ sig. —
Facial dysmorphism, hypertrichosis, epilepsy, intellectual/developmental delay, and gingival overgrowth syndrome Neurodevelopmental delay
1 gene
Show details
KCNK4(1)
0.143 1.000 3.87e-4 7.33e-4 ✓ sig. —

Showing 25 of 32 matching pairs, sorted by significance (descending). Click a column header to sort.