Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Butyrylcholinesterase deficiency Tonic-clonic epilepsy
1 gene
Show details
1 of 1 corroborated by 2+ sources
BCHE(5)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Congenital sensory neuropathy Tonic-clonic epilepsy
1 gene
Show details
1 of 1 corroborated by 2+ sources
NGF(3)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 330 →
Cyp2d6 deficiency Tonic-clonic epilepsy
1 gene
Show details
1 of 1 corroborated by 2+ sources
CYP2D6(3)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
generalized epilepsy-paroxysmal dyskinesia syndrome Idiopathic generalized epilepsy
1 gene
Show details
1 of 1 corroborated by 2+ sources
KCNMA1(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Idiopathic generalized epilepsy sick sinus syndrome 2, autosomal dominant
1 gene
Show details
1 of 1 corroborated by 2+ sources
HCN4(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Prostatic disease Tonic-clonic epilepsy
1 gene
Show details
1 of 1 corroborated by 2+ sources
OXT(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Thyrotoxic periodic paralysis X-linked epilepsy with or without intellectual disability and dysmorphic features
1 gene
Show details
1 of 1 corroborated by 2+ sources
GABRA3(5)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 1 →
Tonic-clonic epilepsy Trismus
1 gene
Show details
1 of 1 corroborated by 2+ sources
BCHE(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Absence epilepsy Birk-barel syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
KCNK9(5)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Continuous spike and wave during slow wave sleep syndrome Familial temporal lobe epilepsy
1 gene
Show details
GRIN2A(1)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
Familial temporal lobe epilepsy lissencephaly with cerebellar hypoplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
RELN(5)
0.111 0.500 9.09e-4 1.58e-3 ✓ sig. —
generalized epilepsy-paroxysmal dyskinesia syndrome Metabolic bone disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
KCNMA1(2)
0.067 1.000 9.09e-4 1.58e-3 ✓ sig. —
Benign adult familial myoclonic epilepsy Cyanosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
ADRA2B(2)
0.125 0.333 9.74e-4 1.67e-3 ✓ sig. —
Childhood-onset epilepsy syndrome Frontal lobe epilepsy
1 gene
Show details
1 of 1 corroborated by 2+ sources
KCNT1(3)
0.125 0.333 9.74e-4 1.67e-3 ✓ sig. Cluster 273 →
Bronchus cancer familial sleep-related hypermotor epilepsy
1 gene
Show details
1 of 1 corroborated by 2+ sources
CHRNA4(2)
0.125 0.333 9.74e-4 1.67e-3 ✓ sig. —
familial sleep-related hypermotor epilepsy Respiratory system cancer
1 gene
Show details
1 of 1 corroborated by 2+ sources
CHRNA4(2)
0.125 0.333 9.74e-4 1.67e-3 ✓ sig. —
Epilepsy with auditory features Focal epilepsy
1 gene
Show details
1 of 1 corroborated by 2+ sources
DEPDC5(3)
0.125 0.250 1.04e-3 1.74e-3 ✓ sig. —
Focal epilepsy Lateral temporal lobe epilepsy
1 gene
Show details
1 of 1 corroborated by 2+ sources
DEPDC5(2)
0.125 0.250 1.04e-3 1.74e-3 ✓ sig. —
Adult myoclonic epilepsy Cri-du-chat syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
CTNND2(2)
0.100 0.500 1.04e-3 1.74e-3 ✓ sig. —
Amelocerebrohypohidrotic syndrome Pyridoxine dependent epilepsy
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC13A5(3)
0.100 0.500 1.04e-3 1.74e-3 ✓ sig. Cluster 365 →
Continuous spike and wave during slow wave sleep syndrome Pyridoxine dependent epilepsy
1 gene
Show details
GRIN2A(1)
0.100 0.500 1.04e-3 1.74e-3 ✓ sig. Cluster 365 →
Dna repair-deficiency disorders Pyridoxine dependent epilepsy
1 gene
Show details
1 of 1 corroborated by 2+ sources
PNKP(2)
0.100 0.500 1.04e-3 1.74e-3 ✓ sig. —
Atypical absence epilepsy Seasonal affective disorder
1 gene
Show details
NPY(1)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
Benign mesial temporal lobe epilepsy Generalized epilepsy with febrile seizures plus
1 gene
Show details
1 of 1 corroborated by 2+ sources
CPA6(3)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. —
congenital muscular dystrophy with intellectual disability and severe epilepsy Primary angle closure glaucoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
DPM2(2)
0.059 1.000 1.04e-3 1.74e-3 ✓ sig. Cluster 21 →

Showing 25 of 420 matching pairs, sorted by significance (ascending). Click a column header to sort.