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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
dilated cardiomyopathy 1HH Myofibrillar myopathy
1 gene
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1 of 1 corroborated by 2+ sources
BAG3(6)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 4 →
dilated cardiomyopathy 1I Myofibrillar myopathy
1 gene
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1 of 1 corroborated by 2+ sources
DES(5)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 4 →
Autoimmune musculoskeletal system disorder Disabling pansclerotic morphea of childhood
1 gene
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1 of 1 corroborated by 2+ sources
STAT4(4)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 1 →
Distal myotilinopathy Myofibrillar myopathy
1 gene
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1 of 1 corroborated by 2+ sources
MYOT(4)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Dna replication fork stabilization factor donson-related microcephaly, short stature, limb abnormalities spectrum Ear, patella, short stature syndrome
1 gene
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DONSON(1)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 171 →
Dna2-related mitochondrial dna deletion syndrome Rothmund-thomson syndrome
1 gene
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1 of 1 corroborated by 2+ sources
DNA2(4)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 80 →
Dominant dystrophic epidermolysis bullosa with absence of skin Duane retraction syndrome
1 gene
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1 of 1 corroborated by 2+ sources
COL7A1(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 160 →
Dominant dystrophic epidermolysis bullosa, albopapular type Duane retraction syndrome
1 gene
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COL7A1(1)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 160 →
Duane retraction syndrome Osteochondroma
1 gene
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1 of 1 corroborated by 2+ sources
PTPN11(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Duane retraction syndrome Osteolysis, hereditary, of carpal bones with or without nephropathy
1 gene
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1 of 1 corroborated by 2+ sources
MAFB(7)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Duane retraction syndrome duane retraction syndrome 2
1 gene
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1 of 1 corroborated by 2+ sources
CHN1(7)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Ductal carcinoma of breast Esophageal stenosis
1 gene
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1 of 1 corroborated by 2+ sources
SOD2(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Angina pectoris Dysbiosis
1 gene
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TLR4(1)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Ear, patella, short stature syndrome meier-gorlin syndrome 7
1 gene
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1 of 1 corroborated by 2+ sources
CDC45(3)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Ear, patella, short stature syndrome Trichiasis
1 gene
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MCM7(1)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Ear, patella, short stature syndrome meier-gorlin syndrome 5
1 gene
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1 of 1 corroborated by 2+ sources
CDC6(3)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 171 →
EEM syndrome Hypotrichosis simplex
1 gene
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1 of 1 corroborated by 2+ sources
CDH3(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Congenital aneurysm of ascending aorta ehlers-danlos syndrome, vascular type
1 gene
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1 of 1 corroborated by 2+ sources
COL3A1(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Idiopathic generalized epilepsy sick sinus syndrome 2, autosomal dominant
1 gene
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1 of 1 corroborated by 2+ sources
HCN4(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
immunodeficiency 114, folate-responsive Megaloblastic anemia
1 gene
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1 of 1 corroborated by 2+ sources
SLC19A1(5)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
immunodeficiency 60 Latent autoimmune diabetes in adults
1 gene
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1 of 1 corroborated by 2+ sources
BACH2(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. Cluster 1 →
Hyperoxaluria immunodeficiency, common variable, 12
1 gene
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1 of 1 corroborated by 2+ sources
NFKB1(3)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Congenital nonspherocytic hemolytic anemia inherited glutathione synthetase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
GSS(3)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Frontotemporal dementia with or without amyotrophic lateral sclerosis inherited neurodegenerative disorder
1 gene
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1 of 1 corroborated by 2+ sources
KIF5A(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —
Hereditary corneal dystrophy inherited prekallikrein deficiency
1 gene
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1 of 1 corroborated by 2+ sources
KLKB1(2)
0.077 1.000 7.79e-4 1.41e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.