Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Central nervous system demyelinating disease Deafness enamel hypoplasia nail defects
1 gene
Show details
1 of 1 corroborated by 2+ sources
PEX6(2)
0.167 0.500 5.19e-4 1.06e-3 ✓ sig. Cluster 219 →
Central nervous system demyelinating disease Deafness-enamel hypoplasia-nail defects syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
PEX6(2)
0.167 0.500 5.19e-4 1.06e-3 ✓ sig. Cluster 219 →
Cerebral cortical atrophy Childhood-onset spinal muscular atrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
BICD2(2)
0.167 0.500 5.19e-4 1.06e-3 ✓ sig. —
Cerebral cortical atrophy Polycystic lipomembranous osteodysplasia with sclerosing leukoencephalopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
TYROBP(5)
0.167 0.500 5.19e-4 1.06e-3 ✓ sig. Cluster 333 →
Anaplastic oligodendroglioma Cerebroretinal microangiopathy with calcifications and cysts
1 gene
Show details
1 of 1 corroborated by 2+ sources
POT1(5)
0.167 0.500 5.19e-4 1.06e-3 ✓ sig. —
Camptocormia Chronic progressive external ophthalmoplegia
1 gene
Show details
1 of 1 corroborated by 2+ sources
RRM2B(2)
0.167 0.500 5.19e-4 1.06e-3 ✓ sig. —
Autoimmune pancreatitis Churg-strauss syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
0.167 0.500 5.19e-4 1.06e-3 ✓ sig. Cluster 1 →
Churg-strauss syndrome Tongue cancer
1 gene
Show details
0.167 0.500 5.19e-4 1.06e-3 ✓ sig. Cluster 1 →
Clear cell papillary renal cell carcinoma Hepatic adenoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
HNF1A(5)
0.167 0.500 5.19e-4 1.06e-3 ✓ sig. —
Clear cell papillary renal cell carcinoma Insulin resistant diabetes mellitus
1 gene
Show details
1 of 1 corroborated by 2+ sources
HNF1A(2)
0.167 0.500 5.19e-4 1.06e-3 ✓ sig. —
Coronary vasospasm Renovascular hypertension
1 gene
Show details
1 of 1 corroborated by 2+ sources
NOS3(2)
0.167 0.500 5.19e-4 1.06e-3 ✓ sig. —
Cortical dysplasia Cortical occipital malformations
1 gene
Show details
TBR1(1)
0.167 0.500 5.19e-4 1.06e-3 ✓ sig. Cluster 275 →
Cortical dysplasia Developmental delay with language impairment and movement disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
TBR1(2)
0.167 0.500 5.19e-4 1.06e-3 ✓ sig. Cluster 275 →
Cortical dysplasia Intellectual developmental disorder autism speech
1 gene
Show details
1 of 1 corroborated by 2+ sources
TBR1(3)
0.167 0.500 5.19e-4 1.06e-3 ✓ sig. Cluster 275 →
Craniofrontonasal dysplasia X-linked hypohidrotic ectodermal dysplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
EDA(3)
0.167 0.500 5.19e-4 1.06e-3 ✓ sig. Cluster 117 →
Cri-du-chat syndrome Macrocytic anemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
TERT(2)
0.167 0.500 5.19e-4 1.06e-3 ✓ sig. —
Anaplastic astrocytoma D-2-hydroxyglutaric aciduria
1 gene
Show details
1 of 1 corroborated by 2+ sources
IDH2(5)
0.167 0.500 5.19e-4 1.06e-3 ✓ sig. —
Anaplastic oligodendroglioma D-2-hydroxyglutaric aciduria
1 gene
Show details
1 of 1 corroborated by 2+ sources
IDH2(5)
0.167 0.500 5.19e-4 1.06e-3 ✓ sig. —
Congenital hypothyroidism due to absence of thyroid gland Deletion 5q35 syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
NKX2-5(2)
0.167 0.500 5.19e-4 1.06e-3 ✓ sig. —
Deoxyguanosine kinase deficiency Interferonopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
SAMHD1(3)
0.167 0.500 5.19e-4 1.06e-3 ✓ sig. Cluster 150 →
Congenital myotonia Metachromatic leukodystrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
CLCN1(2)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Congenital nystagmus Neurooculorenal syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ROBO1(4)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Congenital nystagmus Retinitis pigmentosa with choroidal involvement
1 gene
Show details
1 of 1 corroborated by 2+ sources
RPE65(4)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Congenital sensorineural hearing loss Waardenburg syndrome type 2
1 gene
Show details
1 of 1 corroborated by 2+ sources
MITF(2)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —
Congenital sensorineural hearing loss Deafness with congenital and adult-onset progressive leukodystrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
KARS1(3)
0.111 1.000 5.20e-4 1.06e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.