Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Congenital nemaline myopathy nemaline myopathy 9
1 gene
Show details
1 of 1 corroborated by 2+ sources
KLHL41(4)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 51 →
Nephrotic syndrome, focal segmental type Papillorenal syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
PAX2(3)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —
Neural tube defects, susceptibility to Yellow nail syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
CELSR1(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 94 →
Neurofibrosarcoma noonan syndrome with multiple lentigines
1 gene
Show details
1 of 1 corroborated by 2+ sources
NRAS(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —
neuronopathy, distal hereditary motor, autosomal dominant Vacuolar myopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
HSPB8(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —
Neuropathy, congenital hypomyelinating RHO-related retinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
RHO(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 190 →
Hairy cell leukemia noonan syndrome with multiple lentigines
1 gene
Show details
1 of 1 corroborated by 2+ sources
BRAF(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —
46,xx sex reversal NR2F2 related multiple congenital anomalies/dysmorphic syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
NR2F2(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 38 →
46,xx sex reversal NR5A1-related sex development disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
NR5A1(3)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 38 →
Ocular albinism Usher syndrome type 2D
1 gene
Show details
1 of 1 corroborated by 2+ sources
WHRN(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 84 →
oculocutaneous albinism type 1 Retinoschisis
1 gene
Show details
1 of 1 corroborated by 2+ sources
TYR(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —
OFD1-related ciliopathy Simpson-golabi-behmel syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
OFD1(6)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —
Commissural facial cleft Opitz g/bbb syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SPECC1L(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 203 →
noonan syndrome with multiple lentigines Osteochondroma
1 gene
Show details
1 of 1 corroborated by 2+ sources
PTPN11(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 42 →
Aortic rupture Osteolysis, hereditary multicentric
1 gene
Show details
1 of 1 corroborated by 2+ sources
MMP2(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —
Growth hormone-secreting pituitary adenoma Osteoma cutis
1 gene
Show details
1 of 1 corroborated by 2+ sources
GNAS(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —
Osteopoikilosis Tietz syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
LEMD3(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 175 →
Oculopalatosekeletal syndrome Otodental dysplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
FGF3(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —
Congenital muscular hypertrophy-cerebral syndrome Wiedemann-steiner syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SMC1A(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 297 →
congenital myasthenic syndrome 9 Ptosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
MUSK(2)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —
Congenital nemaline myopathy Zebra body myopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
ACTA1(4)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. —
Congenital nemaline myopathy nemaline myopathy 10
1 gene
Show details
1 of 1 corroborated by 2+ sources
LMOD3(3)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 51 →
Congenital nemaline myopathy Nebulin-related myopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
NEB(5)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 51 →
Congenital or early infantile cach syndrome leukoencephalopathy with vanishing white matter 3
1 gene
Show details
1 of 1 corroborated by 2+ sources
EIF2B3(3)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 170 →
Congenital or early infantile cach syndrome leukoencephalopathy with vanishing white matter 1
1 gene
Show details
1 of 1 corroborated by 2+ sources
EIF2B1(3)
0.167 1.000 3.25e-4 7.71e-4 ✓ sig. Cluster 170 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.