Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Retinitis pigmentosa, juvenile cataract, short stature, intellectual disability syndrome sulfite oxidase deficiency due to molybdenum cofactor deficiency type C
1 gene
Show details
1 of 1 corroborated by 2+ sources
GPHN(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 379 →
Retinitis pigmentosa, x-linked, and sinorespiratory infections with or without deafness X-linked cone-rod dystrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
RPGR(4)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 84 →
Retinopathy background Worth syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
LRP5(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 98 →
Retractile testis Ventricular tachycardia
1 gene
Show details
1 of 1 corroborated by 2+ sources
GNAI2(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Rhabdoid tumor predisposition syndrome Small cell ovary carcinoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
SMARCA4(6)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 120 →
Rhyns syndrome Senior-boichis syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
TMEM67(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 306 →
Cone-rod dystrophy, x-linked RPGR-related retinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
RPGR(4)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 84 →
RPGR-related retinopathy X-linked cone-rod dystrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
RPGR(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 84 →
Myosin storage myopathy Scapuloperoneal myopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
MYH7(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 89 →
Biventricular noncompaction cardiomyopathy Scapuloperoneal myopathy
1 gene
Show details
MYH7(1)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 89 →
MYH7-related skeletal myopathy Scapuloperoneal myopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
MYH7(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 89 →
dilated cardiomyopathy 1S Scapuloperoneal myopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
MYH7(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 89 →
Sertoli-leydig cell tumor of ovary Vertebral anomalies with endocrine and t-cell dysfunction
1 gene
Show details
1 of 1 corroborated by 2+ sources
DICER1(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 395 →
SIN3A-related intellectual disability syndrome Witteveen-kolk syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SIN3A(4)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 343 →
Skeletal system disorder Triphalangeal thumb-polysyndactyly syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SHH(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 232 →
Small cell ovary carcinoma Thoracic neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
SMARCA4(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 120 →
Glucocorticoid-remediable aldosteronism Steroid 11-beta-monooxygenase deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
CYP11B1(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 276 →
syndactyly-telecanthus-anogenital and renal malformations syndrome Toe syndactyly-telecanthus-anogenital and renal malformations syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
CCNQ(4)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
TEK-related primary glaucoma Venous malformation
1 gene
Show details
1 of 1 corroborated by 2+ sources
TEK(4)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 261 →
Hairy cell leukemia Tethered cord syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
BRAF(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Hallermanns syndrome Palmoplantar keratoderma with congenital alopecia
1 gene
Show details
1 of 1 corroborated by 2+ sources
GJA1(4)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 92 →
HBA1-related alpha thalassemia spectrum methemoglobinemia, alpha type
1 gene
Show details
HBA1(1)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 72 →
erythrocytosis, familial, 7 HBA1-related alpha thalassemia spectrum
1 gene
Show details
HBA1(1)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 72 →
HBA2-related alpha thalassemia spectrum methemoglobinemia, alpha type
1 gene
Show details
HBA2(1)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 72 →
erythrocytosis, familial, 7 HBA2-related alpha thalassemia spectrum
1 gene
Show details
HBA2(1)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 72 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.