Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Thyroid cancer Thyroid carcinoma
3 genes
Show details
TRMO(1), NRG1(1), PCNX2(1)
0.073 0.333 8.19e-7 4.87e-6 ✓ sig. Cluster 130 →
Promyelocytic leukemia Systemic mastocytosis
4 genes
Show details
4 of 4 corroborated by 2+ sources
ABCA1(2), TET2(2), KIT(2), ASXL1(2)
0.057 0.174 8.32e-7 4.95e-6 ✓ sig. —
Bone neoplasms Carotid artery disease
4 genes
Show details
4 of 4 corroborated by 2+ sources
PLAU(2), MMP9(2), MMP2(2), LTA(2)
0.055 0.190 8.33e-7 4.95e-6 ✓ sig. —
Non-organic psychosis Substance-induced psychosis
4 genes
Show details
4 of 4 corroborated by 2+ sources
GSTP1(2), NPY1R(2), OPRM1(2), PICK1(2)
0.048 0.235 8.41e-7 5.00e-6 ✓ sig. —
Butterfly-shaped pigmentary macular dystrophy Vitelliform macular dystrophy
2 genes
Show details
1 of 2 corroborated by 2+ sources
PRPH2(4), HTRA1(1)
0.222 0.400 8.43e-7 5.00e-6 ✓ sig. —
Sotos syndrome Weaver syndrome
2 genes
Show details
1 of 2 corroborated by 2+ sources
NSD1(8), PIK3CA(1)
0.222 0.400 8.43e-7 5.00e-6 ✓ sig. —
Chordoma Hereditary breast-ovarian cancer syndrome
2 genes
Show details
2 of 2 corroborated by 2+ sources
PALB2(2), BRCA2(4)
0.222 0.400 8.43e-7 5.00e-6 ✓ sig. —
Li-fraumeni syndrome Sapho syndrome
2 genes
Show details
2 of 2 corroborated by 2+ sources
TP53(7), MDM2(3)
0.222 0.400 8.43e-7 5.00e-6 ✓ sig. Cluster 3 →
Li-fraumeni syndrome Urogenital neoplasms
2 genes
Show details
2 of 2 corroborated by 2+ sources
TP53(7), CDKN2A(3)
0.222 0.400 8.43e-7 5.00e-6 ✓ sig. Cluster 3 →
Hemoglobin e disease Thalassemia
2 genes
Show details
2 of 2 corroborated by 2+ sources
HBB(3), HBD(2)
0.222 0.400 8.43e-7 5.00e-6 ✓ sig. —
Commissural facial cleft Congenital iris coloboma
2 genes
Show details
2 of 2 corroborated by 2+ sources
PAX6(2), SALL2(4)
0.222 0.400 8.43e-7 5.00e-6 ✓ sig. —
Congenital short qt syndrome Long qt syndrome, digenic
2 genes
Show details
2 of 2 corroborated by 2+ sources
KCNH2(2), KCNQ1(2)
0.222 0.400 8.43e-7 5.00e-6 ✓ sig. —
Membranous glomerulonephritis Toxic epidermal necrolysis
4 genes
Show details
1 of 4 corroborated by 2+ sources
POU5F1(1), HLA-B(2), PSORS1C1(1), TCF19(1)
0.062 0.129 8.47e-7 5.02e-6 ✓ sig. —
Atrophy Neuronal ceroid lipofuscinosis
3 genes
Show details
3 of 3 corroborated by 2+ sources
MAPK3(2), RPS6KB1(2), CLN6(7)
0.077 0.300 8.78e-7 5.20e-6 ✓ sig. —
Uterine prolapse Visual system disorder
2 genes
Show details
EFEMP1(1), PNPT1(1)
0.125 1.000 8.86e-7 5.24e-6 ✓ sig. Cluster 146 →
Baraitser-winter cerebrofrontofacial syndrome Coloboma
2 genes
Show details
2 of 2 corroborated by 2+ sources
ACTB(6), ACTG1(7)
0.125 1.000 8.86e-7 5.24e-6 ✓ sig. —
Clinodactyly Micrognathism
3 genes
Show details
DYNC2H1(1), SATB2(1), RPS6KA3(1)
0.091 0.176 9.03e-7 5.34e-6 ✓ sig. —
Bone osteosarcoma Small cell carcinoma
2 genes
Show details
2 of 2 corroborated by 2+ sources
TP53(2), RB1(2)
0.182 0.667 9.11e-7 5.37e-6 ✓ sig. Cluster 3 →
Leukocyte disorders Splenic disease
2 genes
Show details
2 of 2 corroborated by 2+ sources
FAS(2), PLG(3)
0.182 0.667 9.11e-7 5.37e-6 ✓ sig. Cluster 155 →
Congenital afibrinogenemia Thromboembolic pulmonary hypertension
2 genes
Show details
2 of 2 corroborated by 2+ sources
FGA(3), FGG(2)
0.182 0.667 9.11e-7 5.37e-6 ✓ sig. Cluster 149 →
Congenital fibrinogen deficiency Thromboembolic pulmonary hypertension
2 genes
Show details
2 of 2 corroborated by 2+ sources
FGA(4), FGG(3)
0.182 0.667 9.11e-7 5.37e-6 ✓ sig. Cluster 149 →
Congenital hypofibrinogenemia Thromboembolic pulmonary hypertension
2 genes
Show details
2 of 2 corroborated by 2+ sources
FGA(2), FGG(2)
0.182 0.667 9.11e-7 5.37e-6 ✓ sig. Cluster 149 →
Afibrinogenemia Thromboembolic pulmonary hypertension
2 genes
Show details
2 of 2 corroborated by 2+ sources
FGA(2), FGG(2)
0.182 0.667 9.11e-7 5.37e-6 ✓ sig. Cluster 149 →
Venous hypertension Venous insufficiency
2 genes
Show details
SLC19A2(1), F5(1)
0.182 0.667 9.11e-7 5.37e-6 ✓ sig. Cluster 37 →
Cerebral thrombosis Von willebrand disorder
2 genes
Show details
1 of 2 corroborated by 2+ sources
PLAT(1), VWF(8)
0.182 0.667 9.11e-7 5.37e-6 ✓ sig. Cluster 266 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.