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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Neonatal hyperbilirubinemia Small cell carcinoma
1 gene
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1 of 1 corroborated by 2+ sources
UGT1A1(2)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. —
Crigler-najjar syndrome Neonatal hyperbilirubinemia
1 gene
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1 of 1 corroborated by 2+ sources
UGT1A1(6)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. —
Lucey-driscoll syndrome Neonatal hyperbilirubinemia
1 gene
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1 of 1 corroborated by 2+ sources
UGT1A1(3)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. —
Epilepsy of infancy with migrating focal seizures neonatal-onset developmental and epileptic encephalopathy
1 gene
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1 of 1 corroborated by 2+ sources
KCNQ2(2)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. —
Neurooculorenal syndrome Pituitary hormone deficiency
1 gene
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1 of 1 corroborated by 2+ sources
ROBO1(5)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. —
Nocturnal frontal lobe epilepsy primary ciliary dyskinesia 28
1 gene
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1 of 1 corroborated by 2+ sources
SPAG1(2)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. —
normophosphatemic familial tumoral calcinosis Urogenital abnormalities
1 gene
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1 of 1 corroborated by 2+ sources
SAMD9(2)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. —
Exudative vitreoretinopathy norrie disease
1 gene
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1 of 1 corroborated by 2+ sources
NDP(5)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. —
Hyperproinsulinemia obsolete early infantile epileptic encephalopathy
1 gene
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1 of 1 corroborated by 2+ sources
GAD1(3)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. Cluster 325 →
Aniridia Ocular dysgenesis
1 gene
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1 of 1 corroborated by 2+ sources
ELP4(6)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. Cluster 35 →
Diabetic polyneuropathy Other specified diabetes mellitus with unspecified complications
1 gene
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1 of 1 corroborated by 2+ sources
WFS1(2)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. —
Chondrosarcoma exostoses, multiple, type 1
1 gene
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1 of 1 corroborated by 2+ sources
EXT1(6)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. —
Exudative vitreoretinopathy Intellectual developmental disorder dysmorphic ocular microcephaly peripheral
1 gene
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1 of 1 corroborated by 2+ sources
CTNNB1(5)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. —
Fabry disease renal tubular dysgenesis - ACE
1 gene
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1 of 1 corroborated by 2+ sources
ACE(2)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. Cluster 195 →
Fabry disease krabbe disease
1 gene
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1 of 1 corroborated by 2+ sources
GALC(2)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. Cluster 195 →
Fabry disease Peptic esophagitis
1 gene
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VDR(1)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. —
Disseminated intravascular coagulation Factor vii deficiency
1 gene
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1 of 1 corroborated by 2+ sources
F7(5)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. —
Factor xi deficiency Thromboembolic pulmonary hypertension
1 gene
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1 of 1 corroborated by 2+ sources
F11(4)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. —
Congenital joint contractures familial hemiplegic migraine
1 gene
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1 of 1 corroborated by 2+ sources
SCN1A(2)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. —
FAS-related autoimmune lymphoproliferative immune disorder Splenic disease
1 gene
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1 of 1 corroborated by 2+ sources
FAS(3)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. Cluster 155 →
Dystonia musculorum deformans Focal dystonia
1 gene
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1 of 1 corroborated by 2+ sources
GNAL(2)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. Cluster 167 →
Focal dystonia Genetic torsion dystonia
1 gene
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1 of 1 corroborated by 2+ sources
GNAL(2)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. Cluster 167 →
Autoimmune pulmonary alveolar proteinosis Follicular lymphoma
1 gene
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0.100 1.000 5.84e-4 1.16e-3 ✓ sig. Cluster 1 →
Follicular lymphoma Heerfordt syndrome
1 gene
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1 of 1 corroborated by 2+ sources
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. Cluster 1 →
Aniridia FOXC1-related anterior segment dysgenesis
1 gene
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1 of 1 corroborated by 2+ sources
FOXC1(3)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.