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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Coronary artery vasospasm Intestinal perforation
1 gene
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1 of 1 corroborated by 2+ sources
NOS3(2)
0.167 0.333 5.84e-4 1.16e-3 ✓ sig. Cluster 315 →
Coumarin resistance Warfarin sensitivity
1 gene
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1 of 1 corroborated by 2+ sources
CYP2C9(2)
0.167 0.333 5.84e-4 1.16e-3 ✓ sig. —
Dermatitis herpetiformis Spinal cord compression
1 gene
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TNF(1)
0.167 0.333 5.84e-4 1.16e-3 ✓ sig. Cluster 300 →
Dermatitis herpetiformis Desmoid tumor
1 gene
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1 of 1 corroborated by 2+ sources
TNF(2)
0.167 0.333 5.84e-4 1.16e-3 ✓ sig. —
Intellectual disability with strabismus syndrome Triple a syndrome
1 gene
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1 of 1 corroborated by 2+ sources
GMPPA(2)
0.167 0.333 5.84e-4 1.16e-3 ✓ sig. Cluster 295 →
Intestinal perforation Resistant hypertension
1 gene
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1 of 1 corroborated by 2+ sources
NOS3(2)
0.167 0.333 5.84e-4 1.16e-3 ✓ sig. Cluster 315 →
Juvenile parkinsonism Juvenile-onset diabetes mellitus-central and peripheral neurodegeneration syndrome
1 gene
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1 of 1 corroborated by 2+ sources
DNAJC6(3)
0.167 0.333 5.84e-4 1.16e-3 ✓ sig. —
Dominantly inherited sensory neuropathy Episodic pain syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SCN11A(3)
0.167 0.333 5.84e-4 1.16e-3 ✓ sig. —
Early onset vitamin b6 dependent epilepsy Neonatal convulsions
1 gene
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1 of 1 corroborated by 2+ sources
ALDH7A1(2)
0.167 0.333 5.84e-4 1.16e-3 ✓ sig. —
Eichsfeld type congenital muscular dystrophy Multiminicore myopathy
1 gene
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1 of 1 corroborated by 2+ sources
SELENON(3)
0.167 0.333 5.84e-4 1.16e-3 ✓ sig. —
Leukocyte adhesion deficiency Leukocyte disorders
1 gene
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1 of 1 corroborated by 2+ sources
ITGB2(6)
0.167 0.333 5.84e-4 1.16e-3 ✓ sig. Cluster 155 →
Cerebellar ataxia, impaired intellectual development, and dysequilibrium Microlissencephaly
1 gene
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1 of 1 corroborated by 2+ sources
WDR81(2)
0.167 0.333 5.84e-4 1.16e-3 ✓ sig. —
Childhood-onset epilepsy syndrome Early onset epilepsy with developmental delay
1 gene
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1 of 1 corroborated by 2+ sources
ATP6V0C(4)
0.167 0.333 5.84e-4 1.16e-3 ✓ sig. —
Chromosome 22q11.2 microdeletion syndrome Myelogenous leukemia
1 gene
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1 of 1 corroborated by 2+ sources
BCR(3)
0.167 0.333 5.84e-4 1.16e-3 ✓ sig. Cluster 131 →
Cleidocranial dysplasia Metaphyseal dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
RUNX2(6)
0.167 0.333 5.84e-4 1.16e-3 ✓ sig. —
Anuria Asthenozoospermia
1 gene
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1 of 1 corroborated by 2+ sources
PLAU(2)
0.167 0.333 5.84e-4 1.16e-3 ✓ sig. —
Arterial occlusive disease Hepatic lipase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
LIPC(3)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. Cluster 123 →
Arthrogryposis with oculomotor limitation and retinal anomalies Congenital joint contractures
1 gene
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1 of 1 corroborated by 2+ sources
PIEZO2(4)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. —
Asperger syndrome Behavior disorders
1 gene
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1 of 1 corroborated by 2+ sources
SLC6A4(2)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. Cluster 156 →
Ataxia with polyneuropathy Optic neuropathy
1 gene
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ATP6(1)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. —
Atrial tachyarrhythmia, infra-hisian cardiac conduction disease Cardiac conduction disease
1 gene
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1 of 1 corroborated by 2+ sources
TNNI3K(3)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. Cluster 4 →
Atrophia bulborum heritaria Exudative vitreoretinopathy
1 gene
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1 of 1 corroborated by 2+ sources
NDP(4)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. —
autosomal recessive cutis laxa type 2A Benign pemphigus
1 gene
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1 of 1 corroborated by 2+ sources
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. —
autosomal recessive cutis laxa type 2A Darier disease
1 gene
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1 of 1 corroborated by 2+ sources
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. —
autosomal recessive cutis laxa type 2B Benign pemphigus
1 gene
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1 of 1 corroborated by 2+ sources
PYCR1(2)
0.100 1.000 5.84e-4 1.16e-3 ✓ sig. Cluster 80 →

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.