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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▼ Shared cluster
Autoinflammation with episodic fever and immune dysregulation Eosinophilia
1 gene
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1 of 1 corroborated by 2+ sources
SHARPIN(5)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. Cluster 16 →
autosomal dominant slowed nerve conduction velocity Myopathy
1 gene
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1 of 1 corroborated by 2+ sources
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Axonal neuropathy with neuromyotonia Myopathy
1 gene
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1 of 1 corroborated by 2+ sources
HINT1(3)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. Cluster 14 →
Childhood-onset autosomal recessive myopathy with external ophthalmoplegia Myopathy
1 gene
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1 of 1 corroborated by 2+ sources
MYH2(3)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
DPM3-congenital disorder of glycosylation Myopathy
1 gene
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1 of 1 corroborated by 2+ sources
DPM3(2)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Early-onset myopathy-areflexia-respiratory distress-dysphagia syndrome Myopathy
1 gene
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1 of 1 corroborated by 2+ sources
MEGF10(2)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Myopathy myopathy, proximal, and ophthalmoplegia
1 gene
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1 of 1 corroborated by 2+ sources
MYH2(2)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Myopathy nemaline myopathy 5
1 gene
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1 of 1 corroborated by 2+ sources
TNNT1(2)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Eosinophilia Neovascular inflammatory vitreoretinopathy
1 gene
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1 of 1 corroborated by 2+ sources
CAPN5(4)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Congenital finger flexion contractures Myopathy
1 gene
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TNNI2(1)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Eosinophilia intellectual developmental disorder 59
1 gene
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1 of 1 corroborated by 2+ sources
CAMK2G(2)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. —
Eosinophilia jaberi-elahi syndrome
1 gene
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1 of 1 corroborated by 2+ sources
GTPBP2(2)
0.009 1.000 7.27e-3 8.58e-3 ✓ sig. Cluster 16 →
Bell's palsy Intellectual developmental disorder seizures speech
1 gene
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1 of 1 corroborated by 2+ sources
NTNG2(2)
0.017 0.500 7.26e-3 8.57e-3 ✓ sig. —
Aortic valve stenosis Clonal hematopoiesis
1 gene
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ANKRD7(1)
0.017 0.500 7.26e-3 8.57e-3 ✓ sig. —
Autoimmune interstitial lung disease-arthritis syndrome Bell's palsy
1 gene
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1 of 1 corroborated by 2+ sources
NLRP12(2)
0.017 0.500 7.26e-3 8.57e-3 ✓ sig. —
Hereditary chronic pancreatitis Spermatogenic failure, y-linked
1 gene
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1 of 1 corroborated by 2+ sources
CFTR(2)
0.045 0.125 7.25e-3 8.56e-3 ✓ sig. —
Chondromalacia Vascular brain injury
1 gene
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0.045 0.125 7.25e-3 8.56e-3 ✓ sig. —
Chromosomal instability Papillary thyroid cancer
1 gene
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PPP2R5C(1)
0.045 0.125 7.25e-3 8.56e-3 ✓ sig. —
COG5-congenital disorder of glycosylation Dyslexia
1 gene
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1 of 1 corroborated by 2+ sources
COG5(2)
0.009 1.000 7.21e-3 8.52e-3 ✓ sig. —
autosomal agammaglobulinemia Hodgkin lymphoma
1 gene
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1 of 1 corroborated by 2+ sources
TCF3(2)
0.009 1.000 7.21e-3 8.52e-3 ✓ sig. —
Congenital plasmin inhibitor deficiency Hodgkin lymphoma
1 gene
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1 of 1 corroborated by 2+ sources
0.009 1.000 7.21e-3 8.52e-3 ✓ sig. —
Corneal degeneration Keratoconus
1 gene
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RDH8(1)
0.009 1.000 7.21e-3 8.52e-3 ✓ sig. —
Corneal injury Keratoconus
1 gene
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1 of 1 corroborated by 2+ sources
ALDH3A1(3)
0.009 1.000 7.21e-3 8.52e-3 ✓ sig. —
Demyelinating leukodystrophy Dyslexia
1 gene
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1 of 1 corroborated by 2+ sources
LMNB1(2)
0.009 1.000 7.21e-3 8.52e-3 ✓ sig. —
Dentici novelli neurodevelopmental syndrome Hodgkin lymphoma
1 gene
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1 of 1 corroborated by 2+ sources
ZNF526(4)
0.009 1.000 7.21e-3 8.52e-3 ✓ sig. Cluster 225 →

Showing 25 of 20813 pairs, sorted by significance (descending). Click a column header to sort.