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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Atrial fibrillation Curly hair ankyloblepharon nail dysplasia syndrome
1 gene
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1 of 1 corroborated by 2+ sources
RIPK4(3)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation Autoinflammation with episodic fever and immune dysregulation
1 gene
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1 of 1 corroborated by 2+ sources
SHARPIN(4)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation b-cell immunodeficiency, distal limb anomalies, and urogenital malformations
1 gene
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1 of 1 corroborated by 2+ sources
TOP2B(2)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation band heterotopia of brain
1 gene
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1 of 1 corroborated by 2+ sources
EML1(2)
0.001 1.000 5.60e-2 5.77e-2 Cluster 78 →
Atrial fibrillation Cerebellar ataxia, brain abnormalities, and cardiac conduction defects
1 gene
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1 of 1 corroborated by 2+ sources
EXOSC5(4)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation Chopra-amiel-gordon syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ANKRD17(5)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation ciliary dyskinesia, primary, 48, without situs inversus
1 gene
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1 of 1 corroborated by 2+ sources
NME5(2)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation COG5-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
COG5(4)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation Colobomatous macrophthalmia microcornea syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CRIM1(2)
0.001 1.000 5.60e-2 5.77e-2 —
1p36.33 duplication syndrome Alzheimer disease
2 genes
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2 of 2 corroborated by 2+ sources
ATAD3A(3), ATAD3B(3)
0.001 0.667 5.63e-2 5.79e-2 —
Central hypoventilation syndrome Mood disorder
1 gene
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1 of 1 corroborated by 2+ sources
MYO1H(4)
0.003 0.333 5.69e-2 5.86e-2 —
Ankylosing spondylitis Interferon gamma receptor deficiency
1 gene
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1 of 1 corroborated by 2+ sources
IFNGR2(2)
0.003 0.333 5.98e-2 6.15e-2 —
Brody myopathy Heart failure
1 gene
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1 of 1 corroborated by 2+ sources
ATP2A1(6)
0.002 0.500 6.01e-2 6.18e-2 —
Nonalcoholic fatty liver disease Thiamine-responsive maple syrup urine disease
1 gene
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1 of 1 corroborated by 2+ sources
BCKDHB(2)
0.003 0.333 6.03e-2 6.20e-2 —
Neurodevelopmental disorder Usmani-riazuddin syndrome
1 gene
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1 of 1 corroborated by 2+ sources
AP1G1(5)
0.001 1.000 6.09e-2 6.25e-2 Cluster 6 →
Brainstem dysplasia Neurodevelopmental disorder
1 gene
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1 of 1 corroborated by 2+ sources
SMG9(3)
0.001 1.000 6.09e-2 6.25e-2 Cluster 6 →
Brunet-wagner neurodevelopmental syndrome Neurodevelopmental disorder
1 gene
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1 of 1 corroborated by 2+ sources
RBL2(5)
0.001 1.000 6.09e-2 6.25e-2 —
Intellectual developmental disorder dysmorphic strabismus Neurodevelopmental disorder
1 gene
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1 of 1 corroborated by 2+ sources
ADAT3(5)
0.001 1.000 6.09e-2 6.25e-2 —
Intellectual developmental disorder seizures epilepsy Neurodevelopmental disorder
1 gene
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1 of 1 corroborated by 2+ sources
AP2M1(4)
0.001 1.000 6.09e-2 6.25e-2 —
Intellectual developmental disorder seizures polymicrogyria Neurodevelopmental disorder
1 gene
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1 of 1 corroborated by 2+ sources
TCP1(4)
0.001 1.000 6.09e-2 6.25e-2 —
Intellectual disability with craniofacial dysmorphism and macrocephaly Neurodevelopmental disorder
1 gene
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1 of 1 corroborated by 2+ sources
H1-4(2)
0.001 1.000 6.09e-2 6.25e-2 —
kaya-barakat-masson syndrome Neurodevelopmental disorder
1 gene
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1 of 1 corroborated by 2+ sources
YIF1B(2)
0.001 1.000 6.09e-2 6.25e-2 Cluster 6 →
Congenital cataract microcephaly intellectual disability syndrome Neurodevelopmental disorder
1 gene
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1 of 1 corroborated by 2+ sources
MED25(2)
0.001 1.000 6.09e-2 6.25e-2 —
congenital disorder of glycosylation with defective fucosylation 2 Neurodevelopmental disorder
1 gene
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1 of 1 corroborated by 2+ sources
FCSK(2)
0.001 1.000 6.09e-2 6.25e-2 —
microcephalic primordial dwarfism due to RTTN deficiency Neurodevelopmental disorder
1 gene
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1 of 1 corroborated by 2+ sources
RTTN(2)
0.001 1.000 6.09e-2 6.25e-2 —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.